Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1270 ATGGCGGCTGTCCCAGCATCGCGGACCGATCCACCACCGGCAATGGTGCAGCCGCCGCTGCTCGTCTCTGACCCCTTCGCCAAGGACGCCATTCTCGCCTGGTTCCACGGCGAGTTCGCCGCCGCCAACGCCATCATCGACGCCCTCTGCGGCCACCTCGCGCATCTCGCCGCCGCATCCTCAGACTACGACGCCGCTTTCGCCGCCATCCACCGCCGCCGCCTCAACTGGATCCCCGTCATCCAGATGCAGAAGTATCATTCCATCGCCGACGTCACTCTCGAGCTCCGCAGAGTCGCCGAGAAGAAAAGCGAGCACGAAGCAGCGAAAAAAAGCGAGAGCAGCTTCGAAGAGGAAGGGAAATTGGAGAAGGAAACGGCGGAAAACGGCGGAAACGACGGTGATGACGATGCCGCGCCGGAGTATGATTCGCCGGACAGTGAAATTACCGATTCAGGATCTCAGGAAATGCAACCCAGTGTGATGAACAACAACATATGTTCTAATCATGAAGAATGCGAAGGACGTTCTTCACAGATAAAGCTGACAAAAGGTTTCACAGCAAAGGAGTCCGTGAAGGGGCATATGGTGAATGTTGTGAAAGGATTAAAGTTGTATGAGGATGTTTTCTCTGAATCAGAAATCTGCAAGCTGACTGATTTTGTGAAGGAGATTCATGCTGCTGCCCAGAACGGGGAGCTCTCAGGTGAAACTTTTATACTGTTCAACAAACAGATGAAGGGAAACAAGAGAGAGCTGATTCAGTTGGGTGTTCCGATATTTAGACAGATAAAGGACGATAACAAAAGCAATATAGAACCGATTCCAGCACTTCTTCATGATGTCATTGATCACCTTATTCAATGGAAATTAATTCCAGAGTACAAAAGGCCAAATGGTTGTATCATCAACTTTTTTGAAGAGGGGGAATTTTCTCAGCCATTCCTGAAACCACCGCATTTGGACCAACCTCTATCCACACTTCTTCTGTCTGAATCAACTATGGCTTTTGGGCGTATCCTTATGAGTGAAAATGATGGGAACTACAAGGGTCCACTCATGCTCTCATTGAAGGAGGGGTCTCTTTTAGTGATGAGAGGAAACAGTGCTGACATGGCAAGGCACGTAATGTGTCCATCCCCTAACAGAAGGGTGAGCATTACCTTCTTTAGAGTGAGGCCAGACTCCAATCAATGCCAATCACCAACTCCCACCATGACAACTGCGATGACTCTTTGGCAACCTAGCATTGCTAGCCCATTTACTTTGCCAAACGGACCTCTAAGTGGCTATGAGGCTATGAATATGATGCCCCAGTTGGGAATACTTAGTGCTCCAATGGTCATGTTAGCTCCTATGCGCCCTATGGCAGCAAACACTCACAAACTTCCTCGAGGTGGAACTGGGGTTTTCTTGCCTTGGAAGGGGTCAGCCAGAAAACATGCAAGGCATCTTCCACCGCGTGCTCAAAAAGGACGCCTTATGGAATTACCCTCCCCAGTTGAATCACACACGGGAGAGTCCATTTCTGAACCCAGCATTGCTGTTGAAGGATAG 1557 0.4971 MAAVPASRTDPPPAMVQPPLLVSDPFAKDAILAWFHGEFAAANAIIDALCGHLAHLAAASSDYDAAFAAIHRRRLNWIPVIQMQKYHSIADVTLELRRVAEKKSEHEAAKKSESSFEEEGKLEKETAENGGNDGDDDAAPEYDSPDSEITDSGSQEMQPSVMNNNICSNHEECEGRSSQIKLTKGFTAKESVKGHMVNVVKGLKLYEDVFSESEICKLTDFVKEIHAAAQNGELSGETFILFNKQMKGNKRELIQLGVPIFRQIKDDNKSNIEPIPALLHDVIDHLIQWKLIPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPLSTLLLSESTMAFGRILMSENDGNYKGPLMLSLKEGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPTPTMTTAMTLWQPSIASPFTLPNGPLSGYEAMNMMPQLGILSAPMVMLAPMRPMAANTHKLPRGGTGVFLPWKGSARKHARHLPPRAQKGRLMELPSPVESHTGESISEPSIAVEG* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1270 518 MobiDBLite consensus disorder prediction 104 131 - -
Gso19g1270 518 SUPERFAMILY Clavaminate synthase-like 193 393 - -
Gso19g1270 518 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 297 394 IPR005123 -
Gso19g1270 518 Gene3D - 186 401 IPR037151 -
Gso19g1270 518 MobiDBLite consensus disorder prediction 104 168 - -
Gso19g1270 518 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 1 516 - -
Gso19g1270 518 MobiDBLite consensus disorder prediction 147 168 - -
Gso19g1270 518 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 1 516 IPR044842 GO:0003729|GO:0006402|GO:0032451
Gso19g1270 518 MobiDBLite consensus disorder prediction 478 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1270 Gso-Chr19 41235416 41241878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1270 K10767 - gmx:100776159 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1270 19 41235416 41241878 Gso3g1269 3 38365461 38372488 GST
Gso19g1270 19 41235416 41241878 Gso2g1241 2 15425522 15431458 PCT
Gso19g1270 19 41235416 41241878 Gso10g0210 10 2178864 2184404 PCT
Gso2g1241 2 15425522 15431458 Gso19g1270 19 41235416 41241878 PCT
Gso10g0210 10 2178864 2184404 Gso19g1270 19 41235416 41241878 PCT