Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1238 ATGGGTAAGATTCGGAGAGAATCCGCGAGGCCGTTCTCGAATTGTTCGTCGTCGGCGTCTCCGTCATCGGCGCCGCCGGCAACGACGTCGTCGATGTCGTTGACGGACACGGTGAGGGGGTCGCACCGGTTCAAGATCACGGGGTATTCGCTGTCGAAGGGGATTGGGATTGGGAAGTACATAGCGTCGGATATATTCTCGGTGGGAGGGTACGATTGGGCGATCTATTTTTACCCCGATGGGAAGAGCGTTGAGGACAATGCAACGTACGTTTCGCTCTTCATCGCGCTCGCTAGCGAAGGGACCGATGTTAGGGCGCTTTTTGAGTTGACGCTTTTGGATCAGAGTGGGAAGGAGAGGCACAAGGTGCATAGCCATTTTGAGAGGACCCTCGAGAGTGGACCCTACACGTTAAAATACCGTGGTAGCATGTGGGGTTACAAGCGGTTTTTTAAGAGAACAGCACTAGAGACATCAGATTACCTTAAAGATGATTGCCTTAGTGTTAATTGTAGTGTTGGTGTTGTGAAGTCACACACAGAAGGCCCTAAAATATATAAAATCCCAATTCCGCCTTCCAACATGGGTCAGCAATTTGGGAAACTACTAGAAAGTGGGAAAGGCAGTGATGTCAGTTTTGAAGTGAATGGAGAAATTTTCGCTGCTCATAAATTGGTTCTAGCAGCTCGTTCACCTGTTTTCAGGGCCCAACTTTTCGGTCCAATGAAAGATCAGAATACCCATTGTATAAAAGTTGAAGACATGGAGGCTCCAGTTTTCAAGGCATTGCTTCATGTTATATATTGGGACTCACTACCTGACATGCAAGAGCTTACTGGGTTGAGCTCAAAATGGGCTACTACCTTGATGGCTCAGCATCTGCTAGCAGCAGCTGATCGGTATGGCTTGGAGAGACTTAGGCTTATGTGTGAAGCAAGTCTCTGTGATGATGTTGCAATAAACACGGTCGCTACGACTCTAGCTTTGGCAGAACAGCACCATTGTTTCCAACTGAAAGCAGTCTGTCTAAAATTTGTTGCAAGGCCTGAAAATCTCAGAGCTGTGATGCAAACTGATGGTTTTGAGTACTTGAAGGAAAGTTGCCCGTCTGTTTTGACTGAACTTTTGGAGTATGTGGCTAGATTTACTGAGCATTCGGACTTCTTGTGCAAGCATAGGAATGAAGTGATACTTGATGGCAGTGACGTAAATGGAAGGCGGGTGAAGCAAAGACTATAG 1239 0.4713 MGKIRRESARPFSNCSSSASPSSAPPATTSSMSLTDTVRGSHRFKITGYSLSKGIGIGKYIASDIFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMWGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYKIPIPPSNMGQQFGKLLESGKGSDVSFEVNGEIFAAHKLVLAARSPVFRAQLFGPMKDQNTHCIKVEDMEAPVFKALLHVIYWDSLPDMQELTGLSSKWATTLMAQHLLAAADRYGLERLRLMCEASLCDDVAINTVATTLALAEQHHCFQLKAVCLKFVARPENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDFLCKHRNEVILDGSDVNGRRVKQRL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1238 412 ProSiteProfiles BTB domain profile. 209 268 IPR000210 GO:0005515
Gso2g1238 412 SMART math_3 44 156 IPR002083 GO:0005515
Gso2g1238 412 MobiDBLite consensus disorder prediction 1 35 - -
Gso2g1238 412 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 21 391 IPR045005 GO:0016567
Gso2g1238 412 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 38 178 IPR008974 GO:0005515
Gso2g1238 412 CDD BACK_AtBPM-like 315 378 IPR034090 -
Gso2g1238 412 SMART BTB_4 209 318 IPR000210 GO:0005515
Gso2g1238 412 MobiDBLite consensus disorder prediction 10 35 - -
Gso2g1238 412 SUPERFAMILY TRAF domain-like 36 175 - -
Gso2g1238 412 ProSiteProfiles MATH/TRAF domain profile. 39 173 IPR002083 GO:0005515
Gso2g1238 412 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 21 391 - -
Gso2g1238 412 Gene3D Potassium Channel Kv1.1; Chain A 185 312 IPR011333 -
Gso2g1238 412 Gene3D - 318 397 - -
Gso2g1238 412 CDD BTB_POZ_BPM_plant 195 315 - -
Gso2g1238 412 Pfam BTB/POZ domain 200 316 IPR000210 GO:0005515
Gso2g1238 412 CDD MATH 40 173 IPR002083 GO:0005515
Gso2g1238 412 SUPERFAMILY POZ domain 186 316 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1238 Gso-Chr2 15388599 15392849 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1238 K10523 - gmx:100799666 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1238 2 15388599 15392849 Gso2g1238 2 15388599 15392849 ECH
Gso2g1238 2 15388599 15392849 Gso10g0214 10 2223228 2227404 GST
Gso19g1274 19 41292017 41296842 Gso2g1238 2 15388599 15392849 PCT
Gso3g1274 3 38446850 38451596 Gso2g1238 2 15388599 15392849 PCT
Gso2g1238 2 15388599 15392849 Gso19g1274 19 41292017 41296842 PCT
Gso2g1238 2 15388599 15392849 Gso3g1274 3 38446850 38451596 PCT