Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0214 ATGGGTAAGATTCTGAGAGAAACCGCGAGGCCGTTCTCGAATTGTTCGTCGTCGTCGGCGTCTCCGTTGTCGGCGCCGCCGGCAACGACGTCGTCGACGTCGTTGACGGACACGGTGAGGGGGTCGCACCGGTTCAAGATCACGGGGTATTCGCTGTCGAAGGGGATTGGGATTGGGAAGTACATAGCTTCTGATATATTCTCGGTGGGAGGGTACGATTGGGCGATCTATTTTTACCCCGACGGGAAGAGCGTGGAGGACAATGCTACGTACGTTTCGCTCTTCATCGCGCTTGCTAGCGAAGGGACCGACGTTAGGGCGCTTTTTGAGTTGACGCTTTTGGATCAGAGTGGGAAGGAGAGACACAAGGTGCATAGCCATTTTGAGAGGACCCTCGAGAGTGGACCCTACACGTTAAAATACCGTGGTAGCATGTGGGGTTACAAGCGGTTTTTTAAGAGAACAGCACTAGAGACATCAGATTACCTTAAAGATGATTGCCTTAGTGTTAATTGTAGTGTTGGTGTTGTGAAGTCACACACAGAGGGCCCTAAAATATATAAAATCCCTATTCCGTCTTCTAACATGGGTCAGCAATTTGGGAAGCTACTAGAAAGTGGGAAAGACAGTGATGTCAGTTTTGAAGTGAATGGAGAAATTTTCGCTGCTCATAAATTGGTTCTAGCAGCTCGCTCACCTGTTTTCAGGGCTCAACTTTTCGGTCCGATGAAAAATCAGAATACCCATTGTATAAAAGTTGAAGACATGGAGGCTCCAGTTTTTAAGGCATTGCTTCATGTTATATATTGGGACTCACTACCTGACATGCAAGAGCTTACTGGGTTGAGCTCAAAATGGGCTACTACCTTGATGGCTCAGCATCTGCTAGCAGCAGCTGATCGGTATGGCTTAGAGAGACTTAGGCTTATGTGTGAAACAAGTCTCTGTGAAGATGTTGCAATAAACACCGTTGCTACGACTCTAGCCTTGGCAGAACAGCACCATTGTTTCCAACTGAAAGCAGTCTGTCTGAAATTTGTTGCAAGGCCTGAAAATCTCAGAGCTGTGATGCAAACTGATGGTTTTGAGTACTTGAAGGAAAGTTGCCCATCTGTTTTGACTGAGCTTTTGGAGTATGTGGCTAGATTTACTGAGCATTCGGACTTCTTGTGCAAGCATAGGAATGAATTGATACTTGATGGCAGCGACGTAAATGGAAGGCGGGTGAAGCAAAGGCTATAG 1242 0.4694 MGKILRETARPFSNCSSSSASPLSAPPATTSSTSLTDTVRGSHRFKITGYSLSKGIGIGKYIASDIFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMWGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYKIPIPSSNMGQQFGKLLESGKDSDVSFEVNGEIFAAHKLVLAARSPVFRAQLFGPMKNQNTHCIKVEDMEAPVFKALLHVIYWDSLPDMQELTGLSSKWATTLMAQHLLAAADRYGLERLRLMCETSLCEDVAINTVATTLALAEQHHCFQLKAVCLKFVARPENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDFLCKHRNELILDGSDVNGRRVKQRL* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0214 413 ProSiteProfiles BTB domain profile. 210 269 IPR000210 GO:0005515
Gso10g0214 413 SMART math_3 45 157 IPR002083 GO:0005515
Gso10g0214 413 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 22 392 - -
Gso10g0214 413 CDD MATH 41 174 IPR002083 GO:0005515
Gso10g0214 413 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 39 179 IPR008974 GO:0005515
Gso10g0214 413 Gene3D Potassium Channel Kv1.1; Chain A 186 314 IPR011333 -
Gso10g0214 413 ProSiteProfiles MATH/TRAF domain profile. 40 174 IPR002083 GO:0005515
Gso10g0214 413 SUPERFAMILY TRAF domain-like 37 176 - -
Gso10g0214 413 CDD BTB_POZ_BPM_plant 196 316 - -
Gso10g0214 413 MobiDBLite consensus disorder prediction 10 36 - -
Gso10g0214 413 CDD BACK_AtBPM-like 316 379 IPR034090 -
Gso10g0214 413 SMART BTB_4 210 319 IPR000210 GO:0005515
Gso10g0214 413 Gene3D - 319 395 - -
Gso10g0214 413 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 22 392 IPR045005 GO:0016567
Gso10g0214 413 MobiDBLite consensus disorder prediction 1 36 - -
Gso10g0214 413 SUPERFAMILY POZ domain 187 317 IPR011333 -
Gso10g0214 413 Pfam BTB/POZ domain 201 317 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0214 Gso-Chr10 2223228 2227404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0214 K10523 - gmx:100811065 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1238 2 15388599 15392849 Gso10g0214 10 2223228 2227404 GST
Gso19g1274 19 41292017 41296842 Gso10g0214 10 2223228 2227404 PCT
Gso3g1274 3 38446850 38451596 Gso10g0214 10 2223228 2227404 PCT
Gso10g0214 10 2223228 2227404 Gso19g1274 19 41292017 41296842 PCT
Gso10g0214 10 2223228 2227404 Gso3g1274 3 38446850 38451596 PCT