Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0592 ATGGGGGTGATGGTGATAATGGGAAAAGGTTGGTTTTTTAGATGGGTTATGATGATTGGTGTGATGGGTTGGTGTGTGGCAGGGCTTGGGGTGAATTGGGGGACTCAAGCCACACACCAGTTGAGGGCAGACACAGTGGTTGAGATGTTGAAGGACAATGGGATTCAGAAGGTGAAGCTGTTTGATGCAGATGAGTCTAGCATGAGTGCTCTATCTGGCTCTGGGATTGAAGTCATGGTTGCCATTCCCAATAACCAACTTGCTGAGATGAATGACTATGATCGTGCTTTGCAGTGGGTCAAGAAGAATGTCACTCGGTACAACTTCAGGGGTGGAGTTAACATCAAGTATGTAGCAGTTGGGAACGAGCCATTTTTAAAATCCTACAATGGTTCATTCTTGAACATCACCCTCCCTGCATTACAGAACATTCAAAATGCACTCAATGATGCAGGCCTAGGGGACTCCATAAAGGCCACAGTACCCTTAAATGCTGATGTGTACGAGTCTCCACCGAACAGTCCTGTGCCCTCAGCAGGAATATTTAGGCCTGATATAAGTGACCTTATGACCCAAATAGTGCAATTTTTGGCAAAGAACAAAGCACCATTCACAGTCAACATTTACCCCTTCTTGAGCCTCTATGGGAATGACAATTTCCCCTTTGACTATGCCTTCTTTGATGGTGTGGCCAATCCCATAATTGATAATGGGGTTTCATACACCAATGTCTTTGATGCAAATTTTGACACCTTGGTCTCTGCCCTAAAAAAAGTAGGGTATGGGAACATGCCAGTTTTGGTAGGAGAGGTAGGGTGGCCCACAGATGGTGACAAAAATGCTAATGTAGGAAATGCTTTTAGGTTCTACAATGGGCTTCTACCAAGGCTTGCAATGAATAAAGGGACCCCGCTTAGGCCAGGATTTATTGAAGTTTACCTATTTGGGCTCATTGATGAGGATGCCAAGAACATTGCCCCAGGGAACTTTGAGAGACATTGGGGTATTTTTGGGTATGATGGGAAGCCCAAGTTTCCAATGGACCTTTCTGGAAAAGGCCAAAAGAAGGTACTAGTTGGTGCTCAAAATGTGCACTATCTTGAGCCAAATTGGTGCATGTTTAACCCTGATGCACAGGACCTAAGCAAACTTGCTGATAATATAAACTATGCTTGCACCCTTGCTGATTGCACTGCACTTGGATATGGTTCTTCTTGCAACAACTTGGATGCCAATGGAAATGCCTCATATGCATTTAATATGTACTACCAGACACAGGATCAGAATTACATGGCCTGCAATTTTGAAGGCTTGGCAAGGCTTACAACAAGCAATATTTCAACACCTACTTGCAATTTTATTGTTCAGATAAATCCTTCCTTGTCCTCTTCTTTGAGGCCCCAAATAGTAGCTTTCTTGTTTGTCACTCTACTACCCTTCATTCTATTTTTGTAG 1455 0.4357 MGVMVIMGKGWFFRWVMMIGVMGWCVAGLGVNWGTQATHQLRADTVVEMLKDNGIQKVKLFDADESSMSALSGSGIEVMVAIPNNQLAEMNDYDRALQWVKKNVTRYNFRGGVNIKYVAVGNEPFLKSYNGSFLNITLPALQNIQNALNDAGLGDSIKATVPLNADVYESPPNSPVPSAGIFRPDISDLMTQIVQFLAKNKAPFTVNIYPFLSLYGNDNFPFDYAFFDGVANPIIDNGVSYTNVFDANFDTLVSALKKVGYGNMPVLVGEVGWPTDGDKNANVGNAFRFYNGLLPRLAMNKGTPLRPGFIEVYLFGLIDEDAKNIAPGNFERHWGIFGYDGKPKFPMDLSGKGQKKVLVGAQNVHYLEPNWCMFNPDAQDLSKLADNINYACTLADCTALGYGSSCNNLDANGNASYAFNMYYQTQDQNYMACNFEGLARLTTSNISTPTCNFIVQINPSLSSSLRPQIVAFLFVTLLPFILFL* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0592 484 SMART X8_cls 370 453 IPR012946 -
Gso2g0592 484 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 9 466 IPR044965 GO:0004553|GO:0005975
Gso2g0592 484 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 9 466 - -
Gso2g0592 484 ProSitePatterns Glycosyl hydrolases family 17 signature. 264 277 IPR000490 GO:0004553|GO:0005975
Gso2g0592 484 Gene3D Glycosidases 28 357 - -
Gso2g0592 484 Gene3D - 367 463 - -
Gso2g0592 484 SUPERFAMILY (Trans)glycosidases 29 348 IPR017853 -
Gso2g0592 484 Pfam Glycosyl hydrolases family 17 29 348 IPR000490 GO:0004553|GO:0005975
Gso2g0592 484 Pfam X8 domain 371 439 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0592 Gso-Chr2 6180185 6183829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0592 15 457 Miscellaneous Gene Families AT1G64760 73.589 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0592 - - gmx:100788417 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1223 16 31563253 31566624 Gso2g0592 2 6180185 6183829 GST
Gso16g0347 16 3906360 3910300 Gso2g0592 2 6180185 6183829 PCT
Gso2g0592 2 6180185 6183829 Gso16g0347 16 3906360 3910300 PCT