Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0562 ATGATCGAGTTTCCATGCAAAACATACACTCAGAACCTTCGTTCAGTTTCTCGCTGTGGCATTAAAACCAAGGAAAAACGTTACCTCGGAATCATGTCGTGTGTGGCAGCACGTACTGGGCGACAACGACAGCGTTATGAAGACAACATGCGACTCGTTTCTGGATGCATTCCCTATAGATGGAAAAAGGGAAAAGCAGATCAAATGGGAGATACAGAGGAGATAATAGAAGTACTTATGATTTCTTCACCAAAACGTGATGACCTTTTGTTTCCAAAGGGTGGATGGGAGGATGATGAGACTGTCACAGAAGCTGCTTGCCGTGAAGCTCTAGAGGAAGCTGGAGTCAAAGGGATTATAAGGGAAATTCCCTTGGGAAGATGGGAGTTCAGAAGCAAAAGCAGTAATGATTCATGTAGCCAGGAAGGATGGTGTAGAGGGTACATGTTTGCCTTGGAGGTGACTGAAGAACTTGAGACTTGGCCAGAGCAGAAAGACCATAATCGCCAATGGGTAAACATAAAAGAGGCATTCAGACTAAGCCGATATGACTGGATGTGCAAGGCATTGGAGGTGTTTTTAAGAGTTATGGCAGAGGACAGAACACTAAAGAATGAGGAAAATAATGTTGAGTCTGCTTCAATTTCAGTGCCAGATGGGTCAGAAAATCAAAATATGTCATCCAAATACTATAAAAGAACCTCTACTACAAAACACCATGGTATGCCATCAAGAACCAATATCCTGGCCCATGCTTCCCAGGAGATAGCTATGTATTTTGGTTATTGA 789 0.4297 MIEFPCKTYTQNLRSVSRCGIKTKEKRYLGIMSCVAARTGRQRQRYEDNMRLVSGCIPYRWKKGKADQMGDTEEIIEVLMISSPKRDDLLFPKGGWEDDETVTEAACREALEEAGVKGIIREIPLGRWEFRSKSSNDSCSQEGWCRGYMFALEVTEELETWPEQKDHNRQWVNIKEAFRLSRYDWMCKALEVFLRVMAEDRTLKNEENNVESASISVPDGSENQNMSSKYYKRTSTTKHHGMPSRTNILAHASQEIAMYFGY* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0562 262 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 32 222 - -
Gso2g0562 262 MobiDBLite consensus disorder prediction 205 227 - -
Gso2g0562 262 MobiDBLite consensus disorder prediction 208 227 - -
Gso2g0562 262 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 35 195 - -
Gso2g0562 262 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 32 222 - -
Gso2g0562 262 CDD Nudix_Hydrolase_9 52 186 - -
Gso2g0562 262 Pfam NUDIX domain 78 186 IPR000086 -
Gso2g0562 262 ProSitePatterns Nudix box signature. 94 115 IPR020084 GO:0016787
Gso2g0562 262 ProSiteProfiles Nudix hydrolase domain profile. 49 194 IPR000086 -
Gso2g0562 262 SUPERFAMILY Nudix 40 195 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0562 Gso-Chr2 5871972 5876225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0562 K07766 - gmx:100814614 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1194 16 31176042 31181336 Gso2g0562 2 5871972 5876225 GST
Gso16g0382 16 4344170 4348756 Gso2g0562 2 5871972 5876225 PCT
Gso2g0562 2 5871972 5876225 Gso16g0382 16 4344170 4348756 PCT