Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0382 ATGTCGTCTGTGCCGGCACGAACAGGGCGACAAAGACAGCGTTATGAGGACAATTTGCGCCTTGTCTCTGGATGTATTCCCTATAGATGGACAAAGGACAACACAGATCAAATGGGGGAAACCCGGGAGATAATAGAAGTACTTATGGTTTCTTCACCAAAACGTGATGACCTTGTATTCCCAAAGGGTGGATGGGAGGATGATGAGACTGTTACAGAAGCTGCTTGCCGCGAGGCTTTAGAGGAAGCAGGAGTTAAAGGAATACTAAGAGAAATTCCACTAGGAATATGGGAGTTCAGAAGCAAAACCAGTCAAGACTTATGTAGCGTGGAAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACTGAAGAACTTGAGACATGGCCAGAGCAGAAAAACCACGCTCGCCAATGGTTAAACATAAAAGATGCATTCAAACTCAGCCGATATGACTGGATGTGTAATGCACTTGAGGCATTTTTGAGAGTAATGGCAGAAGACAGAAAGCCTGAGAACCAAGACCAGAATGTGGAACTTGAACCCCCTTCAATTGTAGAAGATATGCCAGAATGCCAAAGTATGTCACCTAACTGCTATAAGAGATCCTCTACTATGCAGCACCATGGTATGCCTCCTAAAGCCAATCTTCTGTCACGTGCTACTCGAGAAATAGCCATCCACTTTGGTTATTGA 699 0.4521 MSSVPARTGRQRQRYEDNLRLVSGCIPYRWTKDNTDQMGETREIIEVLMVSSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGILREIPLGIWEFRSKTSQDLCSVEGGCRGYMFALEVTEELETWPEQKNHARQWLNIKDAFKLSRYDWMCNALEAFLRVMAEDRKPENQDQNVELEPPSIVEDMPECQSMSPNCYKRSSTMQHHGMPPKANLLSRATREIAIHFGY* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0382 232 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Gso16g0382 232 ProSiteProfiles Nudix hydrolase domain profile. 18 163 IPR000086 -
Gso16g0382 232 Pfam NUDIX domain 47 155 IPR000086 -
Gso16g0382 232 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 165 - -
Gso16g0382 232 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 191 - -
Gso16g0382 232 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 191 - -
Gso16g0382 232 CDD Nudix_Hydrolase_9 21 155 - -
Gso16g0382 232 SUPERFAMILY Nudix 16 176 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0382 Gso-Chr16 4344170 4348756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0382 K07766 - gmx:100794003 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0382 16 4344170 4348756 Gso16g1194 16 31176042 31181336 PCT
Gso16g0382 16 4344170 4348756 Gso2g0562 2 5871972 5876225 PCT
Gso16g1194 16 31176042 31181336 Gso16g0382 16 4344170 4348756 PCT
Gso2g0562 2 5871972 5876225 Gso16g0382 16 4344170 4348756 PCT