Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1194 ATGTCGTGTGTGGCAGCACGTACTGGGCGACAACGACAGCGTTATGAAGACAATATGCGACTCGTTTCTGGATGTATTCCCTATAGATGGAAAAAGGGAAAAGTAGATCAAATGGGAGATGCAGAGGAGATAATAGAAGTGCTTATGATTTCTTCACCAAAACGTGATGACCTTGTGTTTCCAAAGGGTGGATGGGAGGATGATGAGACTGTTACAGAAGCTGCTTGCCGTGAAGCGCTAGAGGAAGCAGGAGTCAAAGGGATTGTAAGGGAAATTCCCTTGGGAAGATGGGAGTTCAGAAGCAAAAGCAGTAATGATTCATGTAGCCAGGAAGGATGGTGTAGAGGGTACATGTTTGCCTTGGAGGTCACTGAAGAACTTGAGACTTGGCCAGAGCAGAAAGACCATAATCGCCAATGGGTAAACATAAAAGAGGCATTCAGACTAAGCCGATATGACTGGATGTGCAAGGCATTGGAGGTGTTTTTAAGAGTTATGGCAGAGGAAAGAAAGCTAAAGAAGGAGGAAAATAATGTTGATTCTTCTTCAAGTTCAGTGCTAGATGTGTCAGAAAATCAAAATATGTCATCCAAATACTATAAAAGAACAACTACCACACAACACCATAGTATGTCATCAAGAACCAATATCCTGGCCCATGCTTCCCAGGAGATAGCTATCCATTTTGGTTATTGA 696 0.4282 MSCVAARTGRQRQRYEDNMRLVSGCIPYRWKKGKVDQMGDAEEIIEVLMISSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGIVREIPLGRWEFRSKSSNDSCSQEGWCRGYMFALEVTEELETWPEQKDHNRQWVNIKEAFRLSRYDWMCKALEVFLRVMAEERKLKKEENNVDSSSSSVLDVSENQNMSSKYYKRTTTTQHHSMSSRTNILAHASQEIAIHFGY* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1194 231 Pfam NUDIX domain 47 155 IPR000086 -
Gso16g1194 231 ProSiteProfiles Nudix hydrolase domain profile. 18 163 IPR000086 -
Gso16g1194 231 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Gso16g1194 231 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 4 165 - -
Gso16g1194 231 SUPERFAMILY Nudix 10 164 IPR015797 -
Gso16g1194 231 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 191 - -
Gso16g1194 231 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 191 - -
Gso16g1194 231 CDD Nudix_Hydrolase_9 21 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1194 Gso-Chr16 31176042 31181336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1194 K07766 - gmx:100780722 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1194 16 31176042 31181336 Gso2g0562 2 5871972 5876225 GST
Gso16g0382 16 4344170 4348756 Gso16g1194 16 31176042 31181336 PCT
Gso16g1194 16 31176042 31181336 Gso16g0382 16 4344170 4348756 PCT