Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0493 ATGAGTGCCCTCAATTTGAACGCATGGCCACGCCCCAGATCCAGATCCAGATCCCGATCCCCAACCTTTCACGCCGTCAATAAGTTACCCTTCTTCACCGTTACCAAACGGAGAGCATTCTCGCTCTCTGCGGTGCTCACGGTCGAGACGGAAGAGAAGCCACCAATCTTCGACTTCAAGAACTACATGCTTTCCAAAGCGTCCGCGGTCAACAAGGCCCTCGACGACTCCGTTTCGCTCCGCGAGCCCAAGAAGATCCACGAGGCGATGCGGTACTCGCTCCTCGCCGGCGGCAAGCGCGTGCGCCCTGTGTTATGCGTGGCGGCGTGCGAGCTCGTCGGCGGGCACGAGGCCACGGCGATGCCCGCCGCCTGCGCCCTCGAGATGATCCACACCATGTCGCTCATCCACGACGACCTCCCCTGCATGGACAACGACGACCTCCGCCGCGGCAAGCCCACCAACCACACGGTCTTCGGCGAGGACGTCGCCGTCCTCGCCGGCGACGCCCTCCTGGCCTTCGCCTTCGAGCACATCGCCGCCTCCACCCGGGGGGCCTCGGCGCCCCGGATCCTCCGCGCGATCGGCGAGCTCGCGCGGTCGATCGGCTCCGAGGGCCTCGTTGCCGGCCAGGTCGTCGACATCAACTCCGAGGGCCTGGCCGACGTTGGCCTAGAGCGCCTGGAGTTCATCCACGTCCACAAGACCGCCGCGCTCCTCGAGGGTGCGGTTGTCCTCGGCGCCATCCTCGGCGGCGGCACCGACGACGAGGTCGAAAAATTGAGAAAATTCGCTCGCTACATTGGTCTACTCTTTCAGGTTGTTGATGACATTCTCGATGTTACTAAGTCTTCCCAGGAATTGGGAAAGACCGCTGGAAAAGACCTTGTGGCTGATAAGGTTACTTACCCCAAGCTTTTGGGGATTGAGAAGTCTAAGGAGTTTGCTGCGAAACTGAACAAGGATGCTCAGGATCAGCTTGCTGGCTTTGACCCTGTTAAGGCTGCTCCTTTGATTGCTTTAGCCAATTACATTGCTTATAGGCAGAACTAG 1053 0.603 MSALNLNAWPRPRSRSRSRSPTFHAVNKLPFFTVTKRRAFSLSAVLTVETEEKPPIFDFKNYMLSKASAVNKALDDSVSLREPKKIHEAMRYSLLAGGKRVRPVLCVAACELVGGHEATAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHTVFGEDVAVLAGDALLAFAFEHIAASTRGASAPRILRAIGELARSIGSEGLVAGQVVDINSEGLADVGLERLEFIHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAAKLNKDAQDQLAGFDPVKAAPLIALANYIAYRQN* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0493 350 CDD Trans_IPPS_HT 82 348 IPR000092 GO:0008299
Gso2g0493 350 SUPERFAMILY Terpenoid synthases 59 330 IPR008949 -
Gso2g0493 350 ProSitePatterns Polyprenyl synthases signature 2. 268 280 IPR033749 -
Gso2g0493 350 SFLD Isoprenoid Synthase Type I 62 348 - -
Gso2g0493 350 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC 41 350 - -
Gso2g0493 350 MobiDBLite consensus disorder prediction 1 21 - -
Gso2g0493 350 SFLD Polyprenyl Transferase Like 62 348 - -
Gso2g0493 350 Pfam Polyprenyl synthetase 84 320 IPR000092 GO:0008299
Gso2g0493 350 ProSitePatterns Polyprenyl synthases signature 1. 135 151 IPR033749 -
Gso2g0493 350 Gene3D Farnesyl Diphosphate Synthase 56 350 IPR008949 -
Gso2g0493 350 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 41 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0493 Gso-Chr2 5213204 5214674 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0493 K13789 - gmx:100782362 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0493 2 5213204 5214674 Gso16g1136 16 30268102 30269747 GST
Gso11g0545 11 4862238 4870507 Gso2g0493 2 5213204 5214674 PCT
Gso2g0493 2 5213204 5214674 Gso11g0545 11 4862238 4870507 PCT