Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1136 ATGAGTGCCGTGAATTTGAACACATGGCCACGCCCCAGCTTCATTTTGAACCAAACCGCCACAAGAAGATCCAGATCCTCCCCAACCTCTCATTTCTTTCACGGCGTCAATAAGTTACCGTCACCCATTTCCTCCCTCACCGTTGCCAAACGCTCATTTACGCTCTCGGCGGTGCTGACGAAAGAGGACACCGTGGAGACGGAAGAGAAGCCACCGATTTTCGACTTCAAGAACTACATGGTTTCCAAAGCGAGCGCGGTGAACAAGGCCCTCGACGACGCCGTTTCGCTCCGCGAGCCGCAGAAGATCCACGAGGCGATGCGGTACTCGCTCCTCGCCGGCGGCAAGCGCGTGAGGCCGGTTTTGTGCGTGGCGGCCTGCGAGCTCGTCGGCGGCGAGGAGGCCACGGCGATGCCCGCCGCCTGCGCCATCGAGATGATCCACACCATGTCGCTCATCCACGATGACCTCCCCTGCATGGACAACGACGACCTCCGCCGCGGTAAGCCCACCAACCACAAGGTCTTCGGCGAGGACGTCGCCGTCCTCGCCGGCGACGCGCTCCTCGCCTTCGCCTTCGAGCACATCGCCGCCTCCACCCGGGGCGCCTCCCCGGGGCGGATCGTCCGCGCGATCGGCGAGCTTGCGCGGTCGATCGGCTCCGAGGGACTTGTCGCCGGCCAGGTCGTCGACATCAACTCCGAGGGCCTGGCCGACGTGGACCTCGAGCGCCTCGAGTTCATCCACGTCCACAAGACTGCCGCGCTCCTCGAGGGTGCGGTGGTGCTCGGCGCCATCCTCGGCGGCGGCACCGACGACGAGGTCGAGAAATTGAGAAAATTCGCTCGCTACATTGGTCTGCTCTTTCAGGTTGTTGATGACATTCTCGATGTTACCAAGTCATCTCAGGAATTGGGGAAAACCGCAGGAAAAGACCTTGTGGCAGATAAGGTTACTTACCCCAAACTTTTGGGTATTGAGAAATCTAAGGTGTTTGCTGCGAAGTTGAACAAAGATGCTCAGGATCAGCTTGTTGGGTTTGACCCTGTTAAGGCTGCTCCTTTGATTGCTTTAGCCAATTACATTGCTTATAGGCAGAACTAG 1104 0.5906 MSAVNLNTWPRPSFILNQTATRRSRSSPTSHFFHGVNKLPSPISSLTVAKRSFTLSAVLTKEDTVETEEKPPIFDFKNYMVSKASAVNKALDDAVSLREPQKIHEAMRYSLLAGGKRVRPVLCVAACELVGGEEATAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAASTRGASPGRIVRAIGELARSIGSEGLVAGQVVDINSEGLADVDLERLEFIHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKVFAAKLNKDAQDQLVGFDPVKAAPLIALANYIAYRQN* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1136 367 ProSitePatterns Polyprenyl synthases signature 2. 285 297 IPR033749 -
Gso16g1136 367 SUPERFAMILY Terpenoid synthases 76 344 IPR008949 -
Gso16g1136 367 Pfam Polyprenyl synthetase 101 334 IPR000092 GO:0008299
Gso16g1136 367 Gene3D Farnesyl Diphosphate Synthase 73 367 IPR008949 -
Gso16g1136 367 SFLD Isoprenoid Synthase Type I 79 365 - -
Gso16g1136 367 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC 31 367 - -
Gso16g1136 367 CDD Trans_IPPS_HT 99 365 IPR000092 GO:0008299
Gso16g1136 367 ProSitePatterns Polyprenyl synthases signature 1. 152 168 IPR033749 -
Gso16g1136 367 SFLD Polyprenyl Transferase Like 79 365 - -
Gso16g1136 367 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 31 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1136 Gso-Chr16 30268102 30269747 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1136 K13789 - gmx:100785539 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0493 2 5213204 5214674 Gso16g1136 16 30268102 30269747 GST
Gso11g0545 11 4862238 4870507 Gso16g1136 16 30268102 30269747 PCT
Gso16g1136 16 30268102 30269747 Gso11g0545 11 4862238 4870507 PCT