Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0356 ATGGCACGAAGATCCCTCCCTCTCCTAAAGCACCTCCTCCTCTCGCGGCGGATCCCGGCCCGATCCGTGACGTACATGCACCGGCCGGGCGACGGGTCTCCTCGGCCTGTGACGCTGATCCCTGGCGACGGGATCGGGCCGATGGTGACGGGCGCGGTGGAGCAGGTCATGGAGGCCATGCATGCGCCCGTCTACTTTGAGAAGTTCGAGGTCCACGGCCACATGAAGGCCGTGCCGCCGGAGGTCCTCGATTCGATTCGGAAGAACAAGGTCTGTCTCAAGGGTGGACTCGTCACCCCCATGGGCGGTGGCGTCAGTTCCCTCAATGTTCAGCTTCGGAAGGAGCTTGATCTCTATGCTTCTCTTGTTAATTGTTTCAACCTCCCTGGCCTTCCCACGCGCCATGATAATGTTGATATTGTTGTCATCAGGGAGAACACCGAAGGCGAGTACTCCGGCCTCGAACACGAGGTCGTTCCCGGCGTTGTTGAAAGCCTTAAGGTAATAACAAAGTTTTGTTCAGAGCGAATTGCTAAATATGCATTCGAGTATGCTTACCTGAATAACAGAAAGAAGGTGACTGCCGTGCACAAAGCAAATATTATGAAGCTTGCTGATGGTTTATTCTTGGAATCTTGTCGAGAGGTTGCTACAAAGTACCCTGGAATCAAGTATAACGAAATTATTGTGGATAACTGCTGTATGCAGCTTGTTTCAAAGCCTGAACAGTTTGATGTCATGGTGACCCCAAATCTTTATGGAAATCTAGTTGCAAACACTGCAGCAGGCATTGCTGGAGGCACTGGAGTCATGCCAGGAGGTAATGTTGGGGCTGAGCACGCTGTGTTTGAGCAAGGTGCATCAGCGGGAAATGTCGGTAGTGATAAAATAAGGGAACAAAAGAAAGCCAATCCAGTGGCGCTTCTTCTCTCGTCAGCTATGATGCTTAGGCATCTCCAGTTTCCTGCATTTGCTGACCGTTTGGAAACTGCTGTGGAAAAAGTCATCCTGGAGGGCAAATGCCGAACAAAGGATCTTGGAGGGACAAGCACCACCCAAGAGGTTGTGGATGCAGTGATAGATGCTTTAGATTGA 1095 0.5132 MARRSLPLLKHLLLSRRIPARSVTYMHRPGDGSPRPVTLIPGDGIGPMVTGAVEQVMEAMHAPVYFEKFEVHGHMKAVPPEVLDSIRKNKVCLKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGSDKIREQKKANPVALLLSSAMMLRHLQFPAFADRLETAVEKVILEGKCRTKDLGGTSTTQEVVDAVIDALD* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0356 364 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 20 361 - -
Gso2g0356 364 PANTHER NAD-DEPENDENT ISOCITRATE DEHYDROGENASE C,1 20 361 - -
Gso2g0356 364 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 35 363 - -
Gso2g0356 364 SMART Iso_dh_2 36 359 IPR024084 -
Gso2g0356 364 Pfam Isocitrate/isopropylmalate dehydrogenase 37 359 IPR024084 -
Gso2g0356 364 Gene3D Isopropylmalate Dehydrogenase 19 363 - -
Gso2g0356 364 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 34 362 IPR004434 GO:0006099
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0356 Gso-Chr2 3893733 3898294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0356 K00030 - gmx:100800050 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0356 2 3893733 3898294 Gso16g0957 16 26528597 26532088 GST
Gso11g0714 11 6347423 6351590 Gso2g0356 2 3893733 3898294 PCT
Gso2g0356 2 3893733 3898294 Gso11g0714 11 6347423 6351590 PCT