Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0289 ATGAACAAACAACTCAGGCTGCTCTGTCTCTTTATCCTCTTCTCCTTATTTCTCTGTGTGGGTTTCGCCGGCGCCGGAGACGCGGCGGAGAAAAACCCGTTCACCCCAAAAGCCTTCGCGATTCGGTATTGGGACAAAGAGATCCGCAGCGGGTTACCGAAGCCACCGTTTCTTGTATCAAAGGCGTCGCCGCTGAGCGCGGCGGAGGCGGCGGCGTTCTTAAAGCTCGTCTCCGGGAACTCGCTCTCCACGCGGCTGCCGGAATTCTGCGCCGCCGCGAAGCTCCTCTGCTTCCCGGAGGTGGGGCCCCGCCTCGAGAAACACGACAAAGACGCGAACTTTGCTGTTTACAGAGACAATAACTTCACCAACTACGGAACGGGTCGACCTGGTGGACTCGACTCGTTTAAAAACTACTCCGAGGGAGAGAATATTCCGGTGAACGATTTCCGGCGATATAGCCGCGACTCCGCCGGGCATAAAGATGGTTTTCTGAGCTACGGCACGAACGGCAACGTGGTGCAGCAGAGCTTCCATACCTACGCCGCCGGAGCCACCGGCGGCACCGGCGAGTTCAAGCACTACGCCGACGAAACCAACGTCCCGAACCTCGGCTTCACCTCCTATTCCGACAACGCCAACGGCAGAACCCAATCTTTCTCTTCCTACTCCGAAAACGGCAATGCCGGCGAGCAGACATTCACCTCGTACGGCAAAAATGGCAACGGCCCGACCAACGTGTTCGCCTCGTACGGAACAGAGTCCAACGTTGTCGGGTCCGGGTTCTCCAACTACGCTGAGACCGCCAACGCCGCCAACGACACCTTCAAAGGCTACGGCATAGACATGAACAACCCCACCAACACGTTCTCCAACTACGCTGCCGGCGGCAACGGCGCCGTCGAGAGATTCTCCAGCTACCGCGACAAGGCCAACGTCGGCGCCGACTCCTTCACCTCGTACGCCAAAGCCGCCAACGCCGCAGACATCGGATTCTCGAACTACGGCAAGTCCTTCAACGAGGGAACCGACACGTTCACCACGTACGCTAAATCCTCGGATGGCGAAACAAAAGTAGGGTTCACTTCCTACGGCGTAAACAACACTTTCAAGGATTACGAGAAAAAGGGTACCACTGTCTCATTCGCCAGGTACACCAACATTAGCACGACCCTCTCAGTTTCAGCTTCATCAGTCAGTGGCAGTTTGGTAAATAAGTGGGTGGAGCCGGGTAAGTTTTTTCGTGAGAAGATGATGAAGGAAGGAACCGTGATGCCGATGCCTGACATAAAAGATAAAATGCCGGAAAGGTCGTTTTTGCCCCGGAGCATTTTATCGAAATTACCGTTTTCGGTTTCGAAGATTGATGAGTTGAAGCAAGTCTTCAAGGCTTCTGATAACGGCTCCATGGAGAAGATGATGAAGGACTCGTTGGAGGAGTGCGAGCGTGCACCGAGTAGCGGCGAGACAAAACGCTGCGTTGGGTCGCTCGAGGACATGATCGACTTTGCAACCTCTGTTTTGGGCCGAAACGTCGCCGTTCGGACTACCCAGAACGTGAACGGGTCCAAGAAGAGTGTGGTGGTGGGGCCCGTCAGGGGAATCAACGGTGGTAAAGTCACCCAATCAGTGTCGTGCCACCAGAGCCTGTTCCCTTACCTGCTCTACTACTGCCACGCGGTTCCTAAGGTTCGGGTCTACGAAGCGGATCTTCTCGACCCGAAAACAAAAGCTAAGATTAACCGCGGAGTTGCCATCTGCCACTTGGATACATCGGATTGGAGCCCCACACACGGAGCGTTTCTCTCGCTCGGGTCGGTCCCGGGTCGGATCGAGGTGTGCCACTGGATCTTTGAGAACGACATGGCGTGGACCATTGCGGATTGA 1887 0.5559 MNKQLRLLCLFILFSLFLCVGFAGAGDAAEKNPFTPKAFAIRYWDKEIRSGLPKPPFLVSKASPLSAAEAAAFLKLVSGNSLSTRLPEFCAAAKLLCFPEVGPRLEKHDKDANFAVYRDNNFTNYGTGRPGGLDSFKNYSEGENIPVNDFRRYSRDSAGHKDGFLSYGTNGNVVQQSFHTYAAGATGGTGEFKHYADETNVPNLGFTSYSDNANGRTQSFSSYSENGNAGEQTFTSYGKNGNGPTNVFASYGTESNVVGSGFSNYAETANAANDTFKGYGIDMNNPTNTFSNYAAGGNGAVERFSSYRDKANVGADSFTSYAKAANAADIGFSNYGKSFNEGTDTFTTYAKSSDGETKVGFTSYGVNNTFKDYEKKGTTVSFARYTNISTTLSVSASSVSGSLVNKWVEPGKFFREKMMKEGTVMPMPDIKDKMPERSFLPRSILSKLPFSVSKIDELKQVFKASDNGSMEKMMKDSLEECERAPSSGETKRCVGSLEDMIDFATSVLGRNVAVRTTQNVNGSKKSVVVGPVRGINGGKVTQSVSCHQSLFPYLLYYCHAVPKVRVYEADLLDPKTKAKINRGVAICHLDTSDWSPTHGAFLSLGSVPGRIEVCHWIFENDMAWTIAD* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0289 628 Pfam BURP domain 413 625 IPR004873 -
Gso2g0289 628 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 9 628 - -
Gso2g0289 628 SMART BURP_2 411 627 IPR004873 -
Gso2g0289 628 ProSiteProfiles BURP domain profile. 413 627 IPR004873 -
Gso2g0289 628 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 9 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0289 Gso-Chr2 3131579 3134656 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0289 - - gmx:100797939 1228.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0289 2 3131579 3134656 Gso2g0289 2 3131579 3134656 ECH
Gso1g0275 1 3252398 3255474 Gso2g0289 2 3131579 3134656 GST
Gso2g0289 2 3131579 3134656 Gso18g1114 18 20269318 20271711 PCT
Gso18g1114 18 20269318 20271711 Gso2g0289 2 3131579 3134656 PCT