Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0275 ATGAACAAACAACTCACGCTGCTCTGTCTCTTTATCCTCTTCTCATTTCTCAGTGTGGGTTTCGCCGGCGCCGGAGACGCGGCGGAGAAAAACCCTTTCACCCCAAAAGCCTTCGCCATTCGTTATTGGGACAAAGAGATCCGCAGCGGGTTGGCGAAGCCACAGTTTCTTCTGTCTAAGGCGTCGCCGCTAAACGCGGCGGAGGCGGCGGCGTTTGTGAAGCTTGCCTCCGGCAACGCGCTCTCCACGCGGCTGCCGGAATTCTGCGCCGCCGCGAAGCTCCTCTGCTTCCCGGAGGTGGGGTCCAGCCTCGAGAAGCACGACAAAGACGCAAACTTTGCAGTGTACAGAGACAAGAACTTCACCAACTATGGAACGGGTCGACCCGGTGGGCTCGACTCGTTCAAAAACTACTCCGAGGGAGAGAATATTCCAGTGAACGATTTCCGGCGATACAGCCGTGACTCCGCCGGCCACAAGGACGGGTTTTTAAGCTACGGCACGAGCGGCAACGTCGTGCAGCAGAGCTTCCACACCTACGCCGCCGGAGCCACCGGCGGTGCCGGCGAGTTCAAGCGCTACGCCGACGAAACCAACGTTCCCAACCTTGGTTTCACCTCCTACTCCGACAACGCCAACGGCAGAACCCAATCCTTCACTTCCTACTCCGAAAACGGCAATGCCGGCGAGCAGACATTCACCTCGTACGGCAAAAACGGCAACGGCCCGACCAACGTGTTCACCTCGTATGGAACAGAGTCCAACGTTGTCGGGTCAGGGTTCTCCAACTACGTCGAGACCGCCAACGCCGCCAACGACACCTTCAAGGGATACGGCGTCGACATGAACAACCCCACCAACACGTTCTCCAACTACGCCGGCGGCGGCAACGGCGCCGTCGAGAGATTCTCCAGCTACCGCGATAAGGCCAACGTCGGAGCCGACTCCTTCACCTCGTACGCCAAGTCCGCCAACGCCGCCGACATCGGATTCTCCAACTACGGCAAGTCCTTCAACGAGGGAACCGACACGTTCACCTCGTACGCCAAATCCTCGGACGGCGAAACAAAAGTAGGTTTCACTTCCTACGGCGTAAACAACACCTTCAAGGATTACGAGAAAAAGGGTACCACTGTTTCCTTCGCCAGATACACCAACATTAGCACAACTCTCTCAGCTTCAGCTTCAGCTTCATCACTCAGTGGCAGCTTCGTAAATAAATGGGTGGAGCCGGGTAAATTTTTTCGTGAAAAGATGTTGAAGGAAGGGACGGTGATGCCGATGCCTGACATAAAAGATAAATTGCCAGAAAGGTCGTTTTTGCCCCGGAGTATTCTATCGAAATTACCGTTTTCGGTTTCGAAAATTGATGAGTTGAAGCAAGTTTTCAAGGCTTCGGATAACGGTTCCATGGAGAAGATGATGCGTGATTCCTTGGCGGAGTGCGAGCGTGCACCGAGCCGCGGCGAGACAAAACGCTGCGTTGGGTCGCTCGAGGACATGATCGACTTTGCCACCTCTGTTTTGGGCCGAAACGTCGCCGTTCGGACTACCCAGAACGTGAACGGGTCCAAGAAGAGTGTGGTGGTGGGGCCCGTTAGGGGAATCAACGGTGGTAAAGTCACCCAATCCGTGTCGTGCCACCAGAGCCTGTTCCCTTATCTGCTTTACTACTGCCACGCGGTTCCTAAGGTTCGGGTCTACGAAGCGGATCTTCTCGACCCGAAAACAAAGGTCAAGATTAACCGTGGTGTTGCCATCTGTCACTTGGACACCTCCGATTGGAGCCCGACCCATGGAGCATTCATCTCGTTAGGGTCGGGTCCAGGTCGGATTGAGGTGTGCCACTGGATCTTCGAGAATGACGTGGCGTGGACCATTGTGAAGTGA 1890 0.555 MNKQLTLLCLFILFSFLSVGFAGAGDAAEKNPFTPKAFAIRYWDKEIRSGLAKPQFLLSKASPLNAAEAAAFVKLASGNALSTRLPEFCAAAKLLCFPEVGSSLEKHDKDANFAVYRDKNFTNYGTGRPGGLDSFKNYSEGENIPVNDFRRYSRDSAGHKDGFLSYGTSGNVVQQSFHTYAAGATGGAGEFKRYADETNVPNLGFTSYSDNANGRTQSFTSYSENGNAGEQTFTSYGKNGNGPTNVFTSYGTESNVVGSGFSNYVETANAANDTFKGYGVDMNNPTNTFSNYAGGGNGAVERFSSYRDKANVGADSFTSYAKSANAADIGFSNYGKSFNEGTDTFTSYAKSSDGETKVGFTSYGVNNTFKDYEKKGTTVSFARYTNISTTLSASASASSLSGSFVNKWVEPGKFFREKMLKEGTVMPMPDIKDKLPERSFLPRSILSKLPFSVSKIDELKQVFKASDNGSMEKMMRDSLAECERAPSRGETKRCVGSLEDMIDFATSVLGRNVAVRTTQNVNGSKKSVVVGPVRGINGGKVTQSVSCHQSLFPYLLYYCHAVPKVRVYEADLLDPKTKVKINRGVAICHLDTSDWSPTHGAFISLGSGPGRIEVCHWIFENDVAWTIVK* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0275 629 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 7 628 - -
Gso1g0275 629 SMART BURP_2 412 628 IPR004873 -
Gso1g0275 629 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 7 628 - -
Gso1g0275 629 ProSiteProfiles BURP domain profile. 414 628 IPR004873 -
Gso1g0275 629 Pfam BURP domain 414 626 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0275 Gso-Chr1 3252398 3255474 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0275 - - gmx:100776642 1239.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0275 1 3252398 3255474 Gso2g0289 2 3131579 3134656 GST
Gso1g0275 1 3252398 3255474 Gso18g1114 18 20269318 20271711 PCT
Gso18g1114 18 20269318 20271711 Gso1g0275 1 3252398 3255474 PCT