Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0210 ATGAAGAGGGGTAGTAGTACTAGTAGTAAAGTAGAGCCATTTGTGCTACCCAACAGGCTCACACTGCTTCAGATTTTCATGGTGGTGATGCTCCTTTACCTTCTCTTCATGAGCTTCGAAATCCCTCTAGCTTTCAGAGCCGAAAACGGGGTCGTTTTCCTCACCGACGCATTGCCCATGCCCATGCCACTCATGCTCGAAGAATCACGCAACAGTGTCAAAATCAGAGCACCGACAGGGTTAAAGTTGGAGAAAGTTTCCACCTTGAGGTTCAACGAGAGCTTCACGGAGGGTTCGGAGCTGCACAAGGTGGCGCGGCACGCGTGGGTTGCCGGGGAGAAGCTCTGGGGGGAAGTGGAGAGCGGCAAAGTGAAGAGCTTTGCGAAAATTAAGGTAAAAAACGGGTCGGATTCGTGTCCGAATTCGGTGTCGGTCGCCGGGACGGAGTTCCGGGACAAAGGGGTGTTGGTGCTGCCGTGTGGGCTGACGCTCTGGTCGCACGTGACGGTGGTGGGGACGCCGCGGTGGGCCCACGCCGAGAGTGACCCGAAGATAGCGGTGGTGAGGGACGGGGGAGAGGCGGTGATGGTGTCGCAGTTCATGATGGAGTTGCAAGGGTTGAAGGCAGTGGACAAGGAGGAGCCGCCGAGGATTCTGCATTTCAATCCGAGGCTGAGAGGGGATTGGAGTGGGAAGCCAGTGATTGAGCAGAACACTTGCTATAGGATGCAATGGGGTTCTGCTATCAGGTGTGATGGGTGGAAATCTCGTGCGGATGAAGAAACTGTTGATGGACATGTGAAATGTGAAAAGTGGATTCGTGATGACAATAATCATTCTGAAGAGTGGAAGGCGACATGGTGGTTAAACAGATTGATAGGGCGAAAAAAGAAGATGATGGTAGACTGGCCATATCCTTTTGCGGAGGGCAAGTTATTTGTTCTCACCATAAGTGCTGGCTTGGAAGGTTACCATGTTAGTGTGGACGGGAGGCATGTGACATCCTTTCCCTATCGCACGGGGTTTGCCCTTGAGGATGCTACTGGACTATCTATAAATGGGGATGTTGATGTACACTCTATATTTGCTGCTTCCTTACCTACATCACATCCTAGCTTTGCTCCACAGATGCATCTTGAATTGCTTCCTCAGTGGAAAGCTCCTCCTCTTCAGAATGTGAATGTGGAGCTTTTCATTGGTATCCTTTCTGCTGGAAACCATTTTGCTGAACGGATGGCAGTGAGGAAGTCCTGGATGCAGCATAAGCTAATCCAATCTTCACGTGTTGTGGCTCGATTTTTTGTAGCCTTGCATGCAAGGAAGGATATAAATGTGGACATAAAGAAAGAAGCAGAGTATTTTGGTGATATTATTATAGTCCCATACATGGATCATTATGACCTTGTTGTGTTGAAGACCATAGCTATCTGTGAATATGGGATTCGGACCATGACTTCTAAGTATATAATGAAATGTGATGATGACACGTTTGTCAGAGTGGATTCTATCCTAAACGAAGCAAGACAAGTTCGAAGTAGAAGTCTGTACATGGGAAATATGAATTATCACCATAGGCCTCTTCGCCATGGGAAATGGGCTGTAACTTATGAGGAATGGGTAGAGGAAGAATATCCCATCTATGCTAACGGTCCAGGTTACATAGTCTCAGCTGACATTGCTCAGTTCATTGTATCTGAATTTGAGAAGCGCAAATTAAAATTATTCAAAATGGAGGACGTGAGCATGGGAATGTGGGTGGAGCACTTCAACAGCACAAGACCGGTAGAGTACATGCACAACTTGAAGTTCTGCCAATTTGGGTGCATTGAAGAGTACTACACTGCACACTACCAATCACCAAGGCAAATGACATGCATGTGGGAAAAATTGCAACATCAAGGAAAATCACTCTGTTGCAACATGAGATGA 1929 0.4764 MKRGSSTSSKVEPFVLPNRLTLLQIFMVVMLLYLLFMSFEIPLAFRAENGVVFLTDALPMPMPLMLEESRNSVKIRAPTGLKLEKVSTLRFNESFTEGSELHKVARHAWVAGEKLWGEVESGKVKSFAKIKVKNGSDSCPNSVSVAGTEFRDKGVLVLPCGLTLWSHVTVVGTPRWAHAESDPKIAVVRDGGEAVMVSQFMMELQGLKAVDKEEPPRILHFNPRLRGDWSGKPVIEQNTCYRMQWGSAIRCDGWKSRADEETVDGHVKCEKWIRDDNNHSEEWKATWWLNRLIGRKKKMMVDWPYPFAEGKLFVLTISAGLEGYHVSVDGRHVTSFPYRTGFALEDATGLSINGDVDVHSIFAASLPTSHPSFAPQMHLELLPQWKAPPLQNVNVELFIGILSAGNHFAERMAVRKSWMQHKLIQSSRVVARFFVALHARKDINVDIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIRTMTSKYIMKCDDDTFVRVDSILNEARQVRSRSLYMGNMNYHHRPLRHGKWAVTYEEWVEEEYPIYANGPGYIVSADIAQFIVSEFEKRKLKLFKMEDVSMGMWVEHFNSTRPVEYMHNLKFCQFGCIEEYYTAHYQSPRQMTCMWEKLQHQGKSLCCNMR* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0210 642 Pfam Galactosyltransferase 410 588 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso2g0210 642 Gene3D - 154 362 - -
Gso2g0210 642 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 154 364 IPR001079 GO:0030246
Gso2g0210 642 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 14 642 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso2g0210 642 SUPERFAMILY Concanavalin A-like lectins/glucanases 156 362 IPR013320 -
Gso2g0210 642 Pfam Galactoside-binding lectin 156 362 IPR001079 GO:0030246
Gso2g0210 642 SMART Gal_bind_lectin_2 158 363 IPR001079 GO:0030246
Gso2g0210 642 Gene3D - 387 641 - -
Gso2g0210 642 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 14 642 - -
Gso2g0210 642 CDD GLECT 158 362 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0210 Gso-Chr2 2184393 2189563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0210 23 642 Glycosyltransferase AT1G74800 61.679 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0210 K20843 - gmx:100818349 1318.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0210 2 2184393 2189563 Gso2g0210 2 2184393 2189563 ECH
Gso1g0343 1 4318970 4324594 Gso2g0210 2 2184393 2189563 GST
Gso2g0210 2 2184393 2189563 Gso18g1041 18 17329974 17334091 PCT
Gso18g1041 18 17329974 17334091 Gso2g0210 2 2184393 2189563 PCT