Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1041 ATGAAGAGGGTGAAGAAGCTATACCCATTTTTGGTCCTACCCAACAGGCCTAAACCTCTTCAAATTTTCATGGCTGTGATGTTCCTCTACTTGCTCTTCACCACCTTCGAAATCGAAACCTCTCTTGGTTTCAGAACGAGGTTTGTGTCAGTGTCCTCATTGTTGGGGAATGAAGATCAACACCAACGTACCCATTCCAGCAAAGCCTCAAACTTTCCCTCACAAGGGGTGTTCCAAGGCTCACTGCATCGAAAAGCCTTGCAGGGTTTGCAGAAAGTTTCCACCTTGAGTTTCATCGAGGCTTTGAATGACACCACTGTGGAAGAAAACATGTTTTCTGAACTCCACAAGGCAGCTAGGCATGCTTGGGTTGAAGGGAAGAGGCTCTGGGAACAAGTTGAGAGTGTGAAAGAAACCATGAATGTGGCAAGGTTCAAGGCTGAGAACCTTTCTGATTCGTGTCAGCATTCAATTTCATTATCTGGGTCTGAATTGAGGAAGCAGAATAAAGGGGTCATGGTGATGGTGCTTCCTTGTGGTTTGACATTGGGGTCTCACGTGACTGTTGTGGGGACCCCACGTTGGGCTCACTGGGAGGACGATCCTAAGATATCTGTGGTGAAGGAAGAGGAGGGAAAGGTAATGGTGTCGCAGTTCATGATGGAGCTTCAGGGTTTGAAGAGTGTGGACAAGGAAGAGCCTCCTAGGATACTGCATTTCAATCCCAGGTTGAAGGGGGATTATAGTGGGAGGCCTGTGATTGAGCAGAACACTTGTTACAGGATGCAGTGGGGTTCTGCTCTCAGGTGTGAGGGATGGAAGTCCCGAGCTGACGAGGATACAGTTGATGGACAGGTGAAATGTGAAAAGTGGATTCGTGATGATGATAGCCATGCAGAAGAGGCAAAGGCAACATGGTGGTTAACCAGACTGATTGGGCGAACTAAGAAGGTTACTATAGATTGGCCATACCCTTTTGTAGAGGCTAGATTGTTTGTTCTCACCGTGAGTGCTGGCATGGAAGGCTACCATGTTAGTGTGGATGGAAGGCATGTGACATCTTTTCCCTATCGCACGGGATTTTCTCTTGAGGATTCAACTGGTCTATCCATAAAAGGGGATGTTGATGTGCACTCTATATATGCAGCTTCCTTACCCACATCACATCCAAGTTTTGCTCCACAGATGCATCTTGAATTGCTTCCTCAATGGAAAGCTCCACCTCTTGTACACGTGAATGTGGAGCTTTTCATTGGAATACTTTCTGCTGGCAACCATTTTGCTGAGCGGATGGCAGTAAGGAAATCATGGATGCAACATAAACTAATCAAATCTTCAAATGTCGTATCTCGGTTCTTTGTTGCCTTGCATGGAAGGAAAGATTTAAATATGGAGATAAAGAAAGAAGCAGATTATTTTGGCGATATTATTATAGTCCCCTACATGGATCATTATGACCTTGTTGTGTTGAAGACGATAGCTATCACTGAATATGGGATTCGCTCAGTGGCTGCCAAGTATATCATGAAGTGTGATGATGACACGTTTGTCAGAATAGAGTCTATCATCAGCGAAGCAAGAAAAGTAGGAAGTGGTAGAAGTCTCTATATAGGAAATATGAATTACCACCATAGGCCCCTACGTTCTGGCAAATGGGCAGTAACATATGAGGAATGGTCAGAGGAAGAGTATCCTACCTATGCTAATGGTCCAGGCTATACAATCTCTGCAGACATTGCCCAGTTCATTGTATCCAACTTCGAGGAGCACAGATTAAAATTATTTAAAATGGAGGATGTTAGCATGGGAATGTGGGTAGAGCAATTCAACAGTTCAAGGCCAGTTGAGTATGTGCACAGCTTCAAGTTCTGCCAATTTGGGTGCATTGAAGATTACTACACTGCACATTACCAATCTCCAAGACAAATGACCTGTATGTGGGACAAGTTGCAACAAAAGGGAAAGCCCCTATGTTGCAACATGAGATAA 1989 0.4465 MKRVKKLYPFLVLPNRPKPLQIFMAVMFLYLLFTTFEIETSLGFRTRFVSVSSLLGNEDQHQRTHSSKASNFPSQGVFQGSLHRKALQGLQKVSTLSFIEALNDTTVEENMFSELHKAARHAWVEGKRLWEQVESVKETMNVARFKAENLSDSCQHSISLSGSELRKQNKGVMVMVLPCGLTLGSHVTVVGTPRWAHWEDDPKISVVKEEEGKVMVSQFMMELQGLKSVDKEEPPRILHFNPRLKGDYSGRPVIEQNTCYRMQWGSALRCEGWKSRADEDTVDGQVKCEKWIRDDDSHAEEAKATWWLTRLIGRTKKVTIDWPYPFVEARLFVLTVSAGMEGYHVSVDGRHVTSFPYRTGFSLEDSTGLSIKGDVDVHSIYAASLPTSHPSFAPQMHLELLPQWKAPPLVHVNVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSNVVSRFFVALHGRKDLNMEIKKEADYFGDIIIVPYMDHYDLVVLKTIAITEYGIRSVAAKYIMKCDDDTFVRIESIISEARKVGSGRSLYIGNMNYHHRPLRSGKWAVTYEEWSEEEYPTYANGPGYTISADIAQFIVSNFEEHRLKLFKMEDVSMGMWVEQFNSSRPVEYVHSFKFCQFGCIEDYYTAHYQSPRQMTCMWDKLQQKGKPLCCNMR* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1041 662 Gene3D - 167 381 - -
Gso18g1041 662 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 173 383 IPR001079 GO:0030246
Gso18g1041 662 Pfam Galactoside-binding lectin 174 381 IPR001079 GO:0030246
Gso18g1041 662 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 7 662 - -
Gso18g1041 662 Pfam Galactosyltransferase 429 609 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso18g1041 662 SMART Gal_bind_lectin_2 177 382 IPR001079 GO:0030246
Gso18g1041 662 CDD GLECT 177 380 IPR001079 GO:0030246
Gso18g1041 662 Gene3D - 408 646 - -
Gso18g1041 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 175 381 IPR013320 -
Gso18g1041 662 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 662 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1041 Gso-Chr18 17329974 17334091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1041 18 662 Glycosyltransferase AT1G74800 59.132 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1041 K20843 - gmx:100814480 1360.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0343 1 4318970 4324594 Gso18g1041 18 17329974 17334091 PCT
Gso2g0210 2 2184393 2189563 Gso18g1041 18 17329974 17334091 PCT
Gso18g1041 18 17329974 17334091 Gso1g0343 1 4318970 4324594 PCT
Gso18g1041 18 17329974 17334091 Gso2g0210 2 2184393 2189563 PCT