Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1805 ATGTCCATGGCATCGACATCAACACCAGGGTCATCTTCAGAACTAACTATCACAGTTGAACACAATCCTTGCAAATCACGATTATCAGAGCTGGGTATAAATTGGTGGCCCAAATGGGGTTGTCCTCCTGGGAAATTCATGCTCAAATTCGATGCCCAAGAGACGTGTTATTTGCTCAGAGGGAAAGTGAAGGTTTACCCAAAAGGTTCGTCTGAGTTTGTACAATTTGGTGCGGGGGACCTTGTCACCATACCCAAGGGACTTAGTTGCACGTGGGACGTATCCATTGCAGTGGACAAGCATTACAAGTTCGAGTCTTCTTCCACTACACCATCCCCCGAATGA 345 0.4667 MSMASTSTPGSSSELTITVEHNPCKSRLSELGINWWPKWGCPPGKFMLKFDAQETCYLLRGKVKVYPKGSSEFVQFGAGDLVTIPKGLSCTWDVSIAVDKHYKFESSSTTPSPE* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1805 114 SUPERFAMILY RmlC-like cupins 31 95 IPR011051 -
Gso20g1805 114 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 1 111 - -
Gso20g1805 114 CDD cupin_TM1112-like 36 104 - -
Gso20g1805 114 PANTHER OS04G0445200 PROTEIN 1 111 - -
Gso20g1805 114 Pfam EutQ-like cupin domain 28 102 IPR008579 -
Gso20g1805 114 Gene3D Jelly Rolls 4 104 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1805 Gso-Chr20 48715863 48716673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1805 - - gmx:100810390 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1805 20 48715863 48716673 Gso10g1609 10 42622847 42623903 GST
Gso16g1646 16 37148344 37150035 Gso20g1805 20 48715863 48716673 PCT
Gso20g1805 20 48715863 48716673 Gso16g1646 16 37148344 37150035 PCT