Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1646 ATGAGTAACGTGACAGAGAAATTGGGCATCAAGATTGAGAGGAACCCTCCTGAAGACAAGCTCACTCAACTTGGTGTTAGGCAATGGCCCAAATGGGGTTGTCCTCCAAGCAAATTCCCATGGACATATGAATCTAAAGAGACCTGCTATCTCTTGGAAGGAAAAGTGAAGGTTACCCCTAGTGGGGCAAATGAGTCAGTAGAAATTGCTGCTGGTGATTTTGTTGAGTTCCCAAAAGGGATGAGTTGCACTTGGGATGTGTCAGTTGCTGTTGACAAGCACTATAACTTTGAATAA 297 0.4411 MSNVTEKLGIKIERNPPEDKLTQLGVRQWPKWGCPPSKFPWTYESKETCYLLEGKVKVTPSGANESVEIAAGDFVEFPKGMSCTWDVSVAVDKHYNFE* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1646 98 Gene3D Jelly Rolls 1 97 IPR014710 -
Gso16g1646 98 PANTHER OS04G0445200 PROTEIN 3 98 - -
Gso16g1646 98 Pfam EutQ-like cupin domain 22 95 IPR008579 -
Gso16g1646 98 CDD cupin_TM1112-like 29 97 - -
Gso16g1646 98 PANTHER OS04G0445200 PROTEIN 3 98 - -
Gso16g1646 98 SUPERFAMILY RmlC-like cupins 19 95 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1646 Gso-Chr16 37148344 37150035 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1646 K06995 - gmx:100527331 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1646 16 37148344 37150035 Gso20g1805 20 48715863 48716673 PCT
Gso16g1646 16 37148344 37150035 Gso10g1609 10 42622847 42623903 PCT
Gso20g1805 20 48715863 48716673 Gso16g1646 16 37148344 37150035 PCT
Gso10g1609 10 42622847 42623903 Gso16g1646 16 37148344 37150035 PCT