Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1609 ATGGCATCATCATTTGTGGGCACTTTATTACCCAACAAGTTCACACAAAACAAACACTTATCATCTGTTCCTGCAAGTAGAGGTGCTCCAACAAGGAGAAGAGTACACTTAGCAACAACAAGAGCAGAGAGCATGACTACTGTCATAGAAAAACTTGGCATCAAGATTGAGAGGAACCCTCCTGAGTCCAAGCTCACTCAACTGGGTGTTAGGCAATGGCCCAAATGGGGTTGCCCTCCAAGCAAGTTCCCATGGACATATGAAGCCAAAGAGACTTGCTATCTTCTGGAAGGAAAAGTGAAGGTCTTTCCTAGTGGGTCAAATGAGTCAGTTGAAATTGCTGCTGGTGACTTGGTTGTGTTTCCCAAAGGGATGAGTTGCACTTGGGATGTGTCTGTTGGTGTAGACAAGCACTATAATTTTGAATAA 429 0.4406 MASSFVGTLLPNKFTQNKHLSSVPASRGAPTRRRVHLATTRAESMTTVIEKLGIKIERNPPESKLTQLGVRQWPKWGCPPSKFPWTYEAKETCYLLEGKVKVFPSGSNESVEIAAGDLVVFPKGMSCTWDVSVGVDKHYNFE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1609 142 PANTHER OS04G0445200 PROTEIN 27 142 - -
Gso10g1609 142 CDD cupin_TM1112-like 73 141 - -
Gso10g1609 142 PANTHER OS04G0445200 PROTEIN 27 142 - -
Gso10g1609 142 Pfam EutQ-like cupin domain 66 139 IPR008579 -
Gso10g1609 142 Gene3D Jelly Rolls 41 141 IPR014710 -
Gso10g1609 142 SUPERFAMILY RmlC-like cupins 61 139 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1609 Gso-Chr10 42622847 42623903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1609 K06995 - gmx:100527470 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1609 10 42622847 42623903 Gso10g1609 10 42622847 42623903 ECH
Gso20g1805 20 48715863 48716673 Gso10g1609 10 42622847 42623903 GST
Gso16g1646 16 37148344 37150035 Gso10g1609 10 42622847 42623903 PCT
Gso10g1609 10 42622847 42623903 Gso16g1646 16 37148344 37150035 PCT