Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1344 ATGCCTGCGACGGACTACCAAGGTTCGTCTTCTCCTTCATCGTTAACCCATTTTGGCCGTTCAATTCTGAGTCTTCGTCAAGAACAGGTTCACTCCATTTCCATGGAAGGGTCAAGCTTGGAGGCTGAGTTGGAATCCTTTCAGCAACACGTCACTGACCGGTTCCTTGAACTCACTTCGGTTGTTCATGATGATTTGCTTTCGCTCTCGTGGGTTGGGAAGCTCCTTCATTGCTTCCTGTGTTGCCAAGAGGAATTCAAGGCCATTCTCCACAGCCACAGGGCTCAGGTGTTGAGACCCCCATTGGATCGCATGGTGTCTGAATACTTTGAGCGCAGTGTGAAGGCTTTAGATGTTTGCAATGCCATTCGTGACGGTATTGAGCAGATTCGCCAATGGCAGAAGCTGTTGGAGATTGTGCTCTATGCATTGGGGCATCAGAGGAGCATTGGTGAGGGCCAATTTCGTAGAGCCAAGAAGGCCCTCATTGATTTGCACATCGGGATGCTTGATGATCAGGACTCCAACGCATCAATTGCACATCGAAACCGGTCCTTTGGCCGCAGCACTGGTAGCAGAGACAGTCATAGTCATGGTAACAATCATAGCAATAATAATACCTATCACCATCGGTCATTGGGGCATTTTCGATCACTTTCGTGGAGTGTTTCTCGGACTTGGTCTGCTGCTAGGCAGCTCCAAGCAATTGGGAACAACATTTATCCACCTAAGGCAAATGAGCTTATGGCTTCTGGTGGCCTTGCAATGCCTGTGTTCATCATGAATTCGATCCTGTTGTTTGTGATGTTGGCACTTGTGGCTGCAATTCCGTGCCAGGACCGTGGATTACATGTCCATTTTACCATTCCCAGGAATTACTCCTGGGCTGCTGCAATCCTCTCACTTCACGAAAGGATCATGGAGGAGTCGAAGAAACGGGAGCGGAAGAATTCTTGTGGCTTGCTTAAGGAGATTCATCAGATTGAGAAATGTGCTAGAGTGATGAATGATTTGGCTGATTCTGTCCACTTCCCATTGACGGAGGGGAAAGAACGAGAGGTTAGACAGATAGTGCAGGAGGTTTCACAAGTCTGTGATGCTTTGAAAGGTGGACTAGACCCTTTGGAGCGCCAAGTGAGGGATGTCTTCCATAGAATTGTGCGCAGCCGAACAGAAGGGCTTGACTCACTTGGCAGGCCAAGCAATGCTGAGTAA 1215 0.4864 MPATDYQGSSSPSSLTHFGRSILSLRQEQVHSISMEGSSLEAELESFQQHVTDRFLELTSVVHDDLLSLSWVGKLLHCFLCCQEEFKAILHSHRAQVLRPPLDRMVSEYFERSVKALDVCNAIRDGIEQIRQWQKLLEIVLYALGHQRSIGEGQFRRAKKALIDLHIGMLDDQDSNASIAHRNRSFGRSTGSRDSHSHGNNHSNNNTYHHRSLGHFRSLSWSVSRTWSAARQLQAIGNNIYPPKANELMASGGLAMPVFIMNSILLFVMLALVAAIPCQDRGLHVHFTIPRNYSWAAAILSLHERIMEESKKRERKNSCGLLKEIHQIEKCARVMNDLADSVHFPLTEGKEREVRQIVQEVSQVCDALKGGLDPLERQVRDVFHRIVRSRTEGLDSLGRPSNAE* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1344 404 Pfam Protein ROH1-like 16 397 IPR008511 -
Gso20g1344 404 PANTHER BPS1-LIKE PROTEIN 1 402 - -
Gso20g1344 404 PANTHER OS04G0688000 PROTEIN 1 402 - -
Gso20g1344 404 MobiDBLite consensus disorder prediction 184 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1344 Gso-Chr20 43591140 43593362 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1344 - - gmx:100818059 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1344 20 43591140 43593362 Gso10g2011 10 47059100 47061348 GST
Gso16g1337 16 32823535 32825589 Gso20g1344 20 43591140 43593362 PCT
Gso2g0669 2 6937607 6939704 Gso20g1344 20 43591140 43593362 PCT
Gso20g1344 20 43591140 43593362 Gso16g1337 16 32823535 32825589 PCT
Gso20g1344 20 43591140 43593362 Gso2g0669 2 6937607 6939704 PCT