Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2011 ATGCCCGCGACGGACTACCAAGGTTCGTCTTCTCCTTCATCGTTAATCCATTTTGGCCGTTCAATTCTGAGTCTTCGTCGAGAACAGGTTCACTCCATTTCCATGGAAGGGTCAAGCTTGGAGGCTGAGTTAGAATCCTTTCAGCAACACGTCACTAACCGGTTCCTTGAACTCACTTCGGTTGTTCATGATGATTTGCTTTCGCTCTCGTGGGTTGGGAAGCTCCTTCATTGCTTCTTGTGTTGCCAAGAGGAATTCAAGGCCATTCTCCATAGCCACAGGGCTCAGGTGTTGAGACCCCCTTTGGATCGCATGGTGTCTGATTACTTTGAGCGAAGTGTGAAGGCTTTGGATGTTTGCAATGCCATTCGTGATGGTATTGAGCAGATTCGCCAATGGCAGAAGCTATTGGAGATTGTGCCCTATGCATTGGGGCATCAGAGGAGCATTGGTGAGGGCCAATTTCGTAGAGCCAAGAAGGCTCTCATTGATTTGCACATCGGGATGCTTGATGATAAGGATCCCAACGCCTCGATTGCACATCGAAACCGGTCCTTTGGCCGCAGCACTGGTAGCAGGGACCATCATAGTCATGGCCATAGCCATGGTCACAATAATAGCAGTAATAATACCTATCACCATCGGTCTTTGGGGCATTTTCGATCACTTTCGTGGAGTGTCTCTCGAACTTGGTCTGCTGCTAGGCAGCTCCAAGCAATTGGGAACAACATTTATCCACCTAAGGCAAATGAGCTTATGGCTTCTGGTGGCCTTGCAATGCCTGTGTTCATCATGAATTCGATCCTGTTGTTTGTGATGTGGGCTCTTGTGGCTGCAATTCCATGCCAGGACCGCGGATTACATGTCCATTTTACCATTCCCAGGAATTACTCCTGGGCTGCTGCAATCCTCTCGCTTCACGAAAGGATCATGGAGGAGTCGAAGAAGCGGGAGCGGAAGAATTCTTGTGGCTTGCTTAAGGAGATTCATCAGATTGAGAAATGTGCTAGAGTGATGAATGATTTGGCTGATTCTGTCCACTTTCCTTTGACAGAGGAGAAAGAACGGGAGGTTAGACAGATAGTGCAGGAGGTTTCACTAGTCTGTGATGCTTTGAAAGGTGGACTAGACCCTTTGGAGCGCCAAGTGAGGGATGTGTTCCATATAATTGTGCGCAGCCGTACAGAAGGGCTTGACTCTATTGGCAGGCCAAGCAATGCTGAGTAA 1227 0.4849 MPATDYQGSSSPSSLIHFGRSILSLRREQVHSISMEGSSLEAELESFQQHVTNRFLELTSVVHDDLLSLSWVGKLLHCFLCCQEEFKAILHSHRAQVLRPPLDRMVSDYFERSVKALDVCNAIRDGIEQIRQWQKLLEIVPYALGHQRSIGEGQFRRAKKALIDLHIGMLDDKDPNASIAHRNRSFGRSTGSRDHHSHGHSHGHNNSSNNTYHHRSLGHFRSLSWSVSRTWSAARQLQAIGNNIYPPKANELMASGGLAMPVFIMNSILLFVMWALVAAIPCQDRGLHVHFTIPRNYSWAAAILSLHERIMEESKKRERKNSCGLLKEIHQIEKCARVMNDLADSVHFPLTEEKEREVRQIVQEVSLVCDALKGGLDPLERQVRDVFHIIVRSRTEGLDSIGRPSNAE* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2011 408 MobiDBLite consensus disorder prediction 175 211 - -
Gso10g2011 408 Pfam Protein ROH1-like 17 401 IPR008511 -
Gso10g2011 408 PANTHER OS04G0688000 PROTEIN 1 406 - -
Gso10g2011 408 PANTHER BPS1-LIKE PROTEIN 1 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2011 Gso-Chr10 47059100 47061348 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2011 - - gmx:100780049 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2011 10 47059100 47061348 Gso10g2011 10 47059100 47061348 ECH
Gso20g1344 20 43591140 43593362 Gso10g2011 10 47059100 47061348 GST
Gso16g1337 16 32823535 32825589 Gso10g2011 10 47059100 47061348 PCT
Gso2g0669 2 6937607 6939704 Gso10g2011 10 47059100 47061348 PCT
Gso10g2011 10 47059100 47061348 Gso16g1337 16 32823535 32825589 PCT
Gso10g2011 10 47059100 47061348 Gso2g0669 2 6937607 6939704 PCT