Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1337 ATGCGTGCTACAGCAGAATTTCAAGGTTCTGTTCTGAATCTTCGTGGGGTTCAGGTTCACTCCATGGAGGGTTCAAGCATGGAGCAAGAGCTTGATTTGTTTCAGAAGCATGTCACGGAGCGATTCCTGGAGTTATCTTCTGTTGAAAGTGGTGAATTGCTCTCTCTTTCATGGGTTAGGAAGCTGCTAGATTCGTTCCTGTGTTGCCAAGAGGAGTTCAGGGTGATTCTCCACAACCACAGGGATCAGGTGATGAAGCACCCTCCCTTGGATCGCATGGTGGGCGAGTTTTTCGAGCGTAGCGTGAAGGCACTTGATGTGTGCAATGCAATCCGTGATGGAATTGAGCAGATTAGGCAGTGGCAGAAGCTGTTGGAGATTGTTCTCTGTGCTTTGGATCACAAGAGGAGCATTGGTGAGGGCCAATTTCGCCGTGCCAAGAAGGCCCTTGTCGATTTGGCCATTGGGATGCTTGATGATAAGGACTCTAGCTCCAGTGGCTCTATAGCACATAGGAACAGGTCATTTGGTAGAAATAATGCTTCAAAGGATCATCACCACAATAATTCCTTTGGTCATTTTAGATCACTTTCTTGGAGTGTGTCAAGGAATTGGTCTGCTGCTAGGCAGCTTCAAGCACTTGGGAACAACTTGTCCCCTCCCAAGGCCACTGATATTGTTGCCACCAATGGCCTTGCATTGCCTATTTTTACAATGAGTTATGTTATGGTGTTTGTGATGTGGGCACTTGTGGCGGCGATTCCCTGCCAGGACCGCGGGCTGGGGCTCCATTTCTCGGTGCCAAAGCAGTTCTCGTGGGCGGCTCCGGTGGTGGCGCTGCACGAGCGGATCATGGAGGAGTCGAAGAAGAGGGAGAGGAAGAACACCTGTGGCTTGCTGAAGGAGATTCACCAGATTGAGAAGTGTGCTAGGGTGATCAATGATTTGGCTGATTCTGTGCAGTTTCCTTTGAGTGAGGAGAAGGGAGAAGAGGTCAGGCAGAGAGTGCAAGATGTTTCGAAGGTTTGTGAAGCCTTGAAAGATGGATTGGACCCTCTAGAACGCCAAGTGAGGGAGGTGTTCCATAGAATTGTGCGCAGCAGAACCGAGGGGCTTGATTCTCATGGTAGAGGGTAG 1137 0.4978 MRATAEFQGSVLNLRGVQVHSMEGSSMEQELDLFQKHVTERFLELSSVESGELLSLSWVRKLLDSFLCCQEEFRVILHNHRDQVMKHPPLDRMVGEFFERSVKALDVCNAIRDGIEQIRQWQKLLEIVLCALDHKRSIGEGQFRRAKKALVDLAIGMLDDKDSSSSGSIAHRNRSFGRNNASKDHHHNNSFGHFRSLSWSVSRNWSAARQLQALGNNLSPPKATDIVATNGLALPIFTMSYVMVFVMWALVAAIPCQDRGLGLHFSVPKQFSWAAPVVALHERIMEESKKRERKNTCGLLKEIHQIEKCARVINDLADSVQFPLSEEKGEEVRQRVQDVSKVCEALKDGLDPLERQVREVFHRIVRSRTEGLDSHGRG* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1337 378 MobiDBLite consensus disorder prediction 163 183 - -
Gso16g1337 378 PANTHER BPS1-LIKE PROTEIN 1 377 - -
Gso16g1337 378 Pfam Protein ROH1-like 6 374 IPR008511 -
Gso16g1337 378 PANTHER PLANT/F1M20-13 PROTEIN 1 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1337 Gso-Chr16 32823535 32825589 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1337 - - gmx:100776285 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1337 16 32823535 32825589 Gso2g0669 2 6937607 6939704 GST
Gso16g1337 16 32823535 32825589 Gso20g1344 20 43591140 43593362 PCT
Gso16g1337 16 32823535 32825589 Gso10g2011 10 47059100 47061348 PCT
Gso20g1344 20 43591140 43593362 Gso16g1337 16 32823535 32825589 PCT
Gso10g2011 10 47059100 47061348 Gso16g1337 16 32823535 32825589 PCT