Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1309 ATGAATGTGAGAATTATTTGCTGCATGACTCATGACCACTTCTCACTCAAAGTTGTGCTACATGTGGAACTACACGATGGCAAAATTAAGAAAAAAGCCATGAAGATAGTCTCCAATCTTTCAGGGGTTGAATCAGTCTCAATGGATATGAAAGACCAGAAATTGACCTTAATTGGAGATGTCGACCCTGTGGTTGCAGTGGAGAAGCTGAGGAAGCTGTGTGACACTCGCATAGTCTCTGTTGGACCAGCCAAGGAAGAGAATGAGGGAAAGAATAATGAAGTGGAGGCAGCAGAGAATCAAAATCAGAATAACTTGGCTGATAGTGTGAATATCTACGAAGCCTACCACATACATAATCAGTATCAGATGAGGCAACATCATTATTGTTGCACTAGTGTGGAAGAGAATCCTAATGATGCCTGTGTCATTTGCTAA 438 0.4132 MNVRIICCMTHDHFSLKVVLHVELHDGKIKKKAMKIVSNLSGVESVSMDMKDQKLTLIGDVDPVVAVEKLRKLCDTRIVSVGPAKEENEGKNNEVEAAENQNQNNLADSVNIYEAYHIHNQYQMRQHHYCCTSVEENPNDACVIC* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1309 145 Gene3D - 14 87 - -
Gso20g1309 145 Coils Coil 88 108 - -
Gso20g1309 145 SUPERFAMILY HMA, heavy metal-associated domain 18 73 IPR036163 GO:0046872
Gso20g1309 145 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 16 145 - -
Gso20g1309 145 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 16 145 - -
Gso20g1309 145 Pfam Heavy-metal-associated domain 21 72 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1309 Gso-Chr20 43114656 43115640 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1309 - - gmx:100803831 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1309 20 43114656 43115640 Gso20g1309 20 43114656 43115640 ECH
Gso20g1309 20 43114656 43115640 Gso10g2060 10 47603310 47604645 GST
Gso16g1467 16 34860409 34861416 Gso20g1309 20 43114656 43115640 PCT
Gso9g1075 9 30991938 30992925 Gso20g1309 20 43114656 43115640 PCT
Gso20g1309 20 43114656 43115640 Gso16g1467 16 34860409 34861416 PCT
Gso20g1309 20 43114656 43115640 Gso9g1075 9 30991938 30992925 PCT