Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2060 ATGAAGAAAGTTGTGTTGAAGGTGGAAGTACATGAAGACAAAATCAAGCAAAAAGCTATGAAGGTTGTCTCTGGCATTTCAGGGGTTGAGTCAGTTTCTGTGGACATGAAAGACAAGAAATTGACCGTAATTGGGGACATTGATCCAGTAAAAGTAGCAGCCAAGCTGAGGAAGCTTTGTCACGCAGAAATAGTTTCAGTTGGACCAGCAAAAGAGGAAAAGAAGGAAGAGCCTAAAAAAGATGATAAAAAGGAAGATGACAAGAAAAAAAATCCACCAAGCGAAATCGTGGCAGATCAACTCAAGTTCTATCAAACCCATGCCTATTATTATCAGATGAAACCACAATACAATCCATATTACAGTGCCATAAGTGTGGAAGAGGATCCTAATAGCTGTGTCATTATCTAA 411 0.3893 MKKVVLKVEVHEDKIKQKAMKVVSGISGVESVSVDMKDKKLTVIGDIDPVKVAAKLRKLCHAEIVSVGPAKEEKKEEPKKDDKKEDDKKKNPPSEIVADQLKFYQTHAYYYQMKPQYNPYYSAISVEEDPNSCVII* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2060 136 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 136 - -
Gso10g2060 136 Gene3D - 1 73 - -
Gso10g2060 136 SUPERFAMILY HMA, heavy metal-associated domain 2 59 IPR036163 GO:0046872
Gso10g2060 136 Pfam Heavy-metal-associated domain 8 58 IPR006121 GO:0046872
Gso10g2060 136 MobiDBLite consensus disorder prediction 68 96 - -
Gso10g2060 136 MobiDBLite consensus disorder prediction 68 95 - -
Gso10g2060 136 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 136 - -
Gso10g2060 136 CDD HMA 21 59 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2060 Gso-Chr10 47603310 47604645 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2060 - - gmx:100306170 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2060 10 47603310 47604645 Gso10g2060 10 47603310 47604645 ECH
Gso20g1309 20 43114656 43115640 Gso10g2060 10 47603310 47604645 GST
Gso16g1467 16 34860409 34861416 Gso10g2060 10 47603310 47604645 PCT
Gso9g1075 9 30991938 30992925 Gso10g2060 10 47603310 47604645 PCT
Gso10g2060 10 47603310 47604645 Gso16g1467 16 34860409 34861416 PCT
Gso10g2060 10 47603310 47604645 Gso9g1075 9 30991938 30992925 PCT