Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1467 ATGAAGAAAATTGTGTTAAAGGTGGACTTACATGATGACAGGATCAAGCGAAAAGCTATGAAGACAGCATCTGGCCTTTCGGGGGTTCAATCAGTTTCTGTTGACATTAATGACAAGAAAATGACCTTATTGGGGGATGTTGATCCAGTGAGTGCAGTGTCAAAGCTACGAAAGTGGTGTCACACTGAAATAGTCTCAGTTGGACCAGCAAAAGAGGAAAAGGAGAAAGAGAAAGTGGAGCCAGCAAAAGAACCTGTTCCTCTCAAGCTCTATGATGCCTATCCCTTTTATTATCATATGACACCACCACTGTATCTGTATAGTTAA 327 0.4128 MKKIVLKVDLHDDRIKRKAMKTASGLSGVQSVSVDINDKKMTLLGDVDPVSAVSKLRKWCHTEIVSVGPAKEEKEKEKVEPAKEPVPLKLYDAYPFYYHMTPPLYLYS* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1467 108 Pfam Heavy-metal-associated domain 6 58 IPR006121 GO:0046872
Gso16g1467 108 SUPERFAMILY HMA, heavy metal-associated domain 1 60 IPR036163 GO:0046872
Gso16g1467 108 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 98 - -
Gso16g1467 108 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 98 - -
Gso16g1467 108 Gene3D - 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1467 Gso-Chr16 34860409 34861416 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1467 - - gmx:100783411 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1467 16 34860409 34861416 Gso9g1075 9 30991938 30992925 GST
Gso16g1467 16 34860409 34861416 Gso20g1309 20 43114656 43115640 PCT
Gso16g1467 16 34860409 34861416 Gso10g2060 10 47603310 47604645 PCT
Gso20g1309 20 43114656 43115640 Gso16g1467 16 34860409 34861416 PCT
Gso10g2060 10 47603310 47604645 Gso16g1467 16 34860409 34861416 PCT