Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1994 ATGGCTTCTATCCTCCACTACTTTTTAGCCCTCTCTCTTTCTTTCTCTTTCCTTTTCTTCTTATCCGACTCCGTCCCCATTCCCCAACACCACACTAACCCTACAAAACCTATAAACCTTCTGGTTCTACCCGTTCAAAATGATGCTTCCACAGGGCTCCATTGGGCCAACCTCCAAAAAAGGACCCCTCTAATGCAAGTACCAGTCCTGGTGGACCTCAATGGAAACCACTTGTGGGTTAACTGTGAGCAACACTACTCATCCAAAACATACCAAGCACCCTTCTGCCACTCCACCCAATGCTCCAGAGCCAACACTCACCAATGCCTCAGTTGCCCAGCGGCATCAAGGCCAGGGTGCCACAAAAACACGTGTGGCCTCATGTCCACCAACCCCATCACCCAACAAACCGGTTTGGGTGAACTAGGCCAAGATGTGCTTGCAATCCACGCCACTCAAGGCTCCACCCAACAACTTGGTCCATTGGTCACAGTCCCTCAGTTCCTCTTTTCTTGTGCACCTTCCTTCCTTCTTCAAAAGGGTCTCCCTAGAAACATTCAAGGAGTGGCTGGGTTAGGCCATGCACCAATTTCTCTTCCAAACCAACTTGCCTCCCACTTTGGCCTACAACACCAATTCACCACTTGCCTCTCTCGCTACCCTACCTCAAAGGGTGCTCTAATCTTCGGGGATGCACCAAACAACATGCAACAATTTCACAACCAAGATATTTTCCACGATTTGGCTTTCACCCCATTAACCGTCACACCACAAGGAGAATACAACGTGAGAGTCAGCTCCATAAGAATCAACCAGCACAGTGTGTTCCCACCGAACAAGATATCATCAACCATCGTAGGGTCTTCTGGAGGAACAATGATTAGCACCTCAACTCCTCACATGGTTCTCCAGCAATCTTTGTATCAGGCTTTCACTCAGGTGTTTGCTCAGCAGCTGGAAAAGCAAGCACAGGTGAAATCTGTGGCACCGTTTGGGCTATGCTTCAACTCCAACAAGATCAATGCATATCCTAGCGTGGACCTTGTGATGGACAAGCCTAATGGTCCTGTTTGGAGAATCTCTGGTGAGGACTTGATGGTGCAGGCACAACCTGGGGTCACGTGTTTGGGTGTTATGAATGGAGGAATGCAACCTAGAGCTGAAGTTACCTTAGGGACACGCCAGTTGGAAGAGAAGCTGATGGTATTCGATCTTGCAAGGTCAAGGGTCGGGTTTAGCACGTCATCACTGCACTCGCATGGAGTCAAATGTGGTGACCTCTTCAACTTTGCCAATGCATGA 1302 0.49 MASILHYFLALSLSFSFLFFLSDSVPIPQHHTNPTKPINLLVLPVQNDASTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQHYSSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGQDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLLQKGLPRNIQGVAGLGHAPISLPNQLASHFGLQHQFTTCLSRYPTSKGALIFGDAPNNMQQFHNQDIFHDLAFTPLTVTPQGEYNVRVSSIRINQHSVFPPNKISSTIVGSSGGTMISTSTPHMVLQQSLYQAFTQVFAQQLEKQAQVKSVAPFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEVTLGTRQLEEKLMVFDLARSRVGFSTSSLHSHGVKCGDLFNFANA* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1994 433 PANTHER BASIC 7S GLOBULIN 6 430 - -
Gso19g1994 433 PANTHER ASPARTYL PROTEASE-RELATED 6 430 IPR001461 GO:0004190|GO:0006508
Gso19g1994 433 SUPERFAMILY Acid proteases 45 417 IPR021109 -
Gso19g1994 433 CDD xylanase_inhibitor_I_like 59 415 IPR033868 -
Gso19g1994 433 Gene3D Acid Proteases 232 433 IPR021109 -
Gso19g1994 433 ProSiteProfiles Peptidase family A1 domain profile. 54 413 IPR033121 -
Gso19g1994 433 Gene3D Acid Proteases 32 231 IPR021109 -
Gso19g1994 433 Pfam Xylanase inhibitor C-terminal 260 413 IPR032799 -
Gso19g1994 433 Pfam Xylanase inhibitor N-terminal 57 231 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1994 Gso-Chr19 48540772 48542285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1994 - - gmx:547485 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1994 19 48540772 48542285 Gso19g1994 19 48540772 48542285 ECH
Gso2g1229 2 15296077 15297742 Gso19g1994 19 48540772 48542285 ECH
Gso19g1994 19 48540772 48542285 Gso3g2035 3 45754781 45756284 GST