Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2035 ATGGCTTCCATCCTCCACTACTTTTTAGCCCTCTCTCTTTCTTGCTCTTTTCTTTTCTTCTTATCCGACTCAGTCACCCCTACAAAACCAATAAACCTTGTTGTTCTACCCGTTCAAAATGATGGTTCCACAGGGCTCCATTGGGCCAACCTCCAAAAAAGAACCCCTCTAATGCAAGTACCAGTCCTGGTGGACCTCAATGGAAATCACTTGTGGGTTAACTGTGAGCAGCAGTACTCATCCAAAACGTACCAAGCACCCTTCTGCCACTCCACCCAATGCTCTAGAGCCAACACCCACCAATGCCTCAGTTGCCCCGCGGCATCAAGGCCAGGGTGCCACAAAAACACGTGTGGCCTCATGTCCACTAATCCCATCACCCAACAAACCGGTTTGGGTGAACTAGGAGAAGACGTTCTTGCAATCCACGCCACACAAGGGTCGACCCAACAACTTGGCCCATTGGTCACAGTCCCACAATTCCTCTTTTCTTGTGCACCTTCCTTCCTTGTTCAAAAGGGTCTTCCTAGAAACACTCAAGGTGTGGCTGGGTTAGGCCATGCACCAATTTCTCTTCCAAACCAACTCGCTTCCCACTTTGGCCTACAACGCCAATTCACCACTTGCCTTTCTCGCTACCCTACTTCAAAGGGTGCTATAATATTCGGGGATGCACCTAACAACATGCGACAGTTTCAAAACCAAGATATTTTCCACGATTTGGCCTTCACCCCATTAACCATCACCCTGCAGGGAGAGTACAACGTGAGAGTCAACTCAATAAGAATCAACCAGCACAGTGTGTTCCCACTGAACAAGATATCATCCACCATCGTAGGGTCGACCTCTGGAGGAACCATGATTAGCACCTCAACTCCTCACATGGTTCTCCAGCAATCCGTGTACCAGGCTTTCACTCAGGTGTTTGCTCAGCAGCTGCCAAAGCAAGCACAGGTGAAATCTGTGGCACCATTTGGGTTATGCTTCAACTCCAACAAGATCAATGCATATCCTAGCGTGGACCTTGTGATGGACAAGCCCAATGGTCCTGTTTGGAGAATCTCTGGTGAGGACTTGATGGTGCAGGCACAACCTGGGGTCACGTGTTTGGGTGTTATGAATGGAGGAATGCAACCTAGAGCTGAAATTACCTTAGGGGCACGTCAGTTGGAAGAGAACCTGGTGGTGTTCGATCTTGCAAGGTCAAGGGTCGGGTTTAGCACCTCATCACTGCACTCGCATGGAGTCAAATGTGCTGACCTCTTCAACTTTGCCAATGCATGA 1284 0.4914 MASILHYFLALSLSCSFLFFLSDSVTPTKPINLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCADLFNFANA* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2035 427 SUPERFAMILY Acid proteases 38 411 IPR021109 -
Gso3g2035 427 CDD xylanase_inhibitor_I_like 52 409 IPR033868 -
Gso3g2035 427 Pfam Xylanase inhibitor N-terminal 50 224 IPR032861 -
Gso3g2035 427 Gene3D Acid Proteases 225 427 IPR021109 -
Gso3g2035 427 PANTHER BASIC 7S GLOBULIN 6 424 - -
Gso3g2035 427 PANTHER ASPARTYL PROTEASE-RELATED 6 424 IPR001461 GO:0004190|GO:0006508
Gso3g2035 427 Gene3D Acid Proteases 25 224 IPR021109 -
Gso3g2035 427 Pfam Xylanase inhibitor C-terminal 253 407 IPR032799 -
Gso3g2035 427 ProSiteProfiles Peptidase family A1 domain profile. 47 407 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2035 Gso-Chr3 45754781 45756284 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2035 - - gmx:547908 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1994 19 48540772 48542285 Gso3g2035 3 45754781 45756284 GST