Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1260 ATGGACGACGTCGCTTTTTACTCTCTGCTTTTCCTGTGCTTCTTTCAATCGGTGCGAGGGATTTTGGACCCCAACGATTTCCTCGCTCTGCAATCAATTCGGAAATCCCTTCACGATGTTCCCGGTTCCAATTTTTTCTCCTCCTGGGACTTCACCGCCGACCCCTGCAACTTCGCCGGCGTTTTCTGCGCCGACGACAAAGTCATCGCGCTCAACCTCGGCGATCCTAGAGCCGGTTCTCCCGGTCTCACCGGAAAACTTGACCCTTCCATTTCCAAACTCTCCGCTCTCGCAGACTTCACCGTCGTTCCGGGAAGAATCTACGGTCCTCTCCCTCAGTCTCTCTCTCAGTTAAAAAACCTCCGCTTCCTCGGCCTCAGCCGCAACTTCATCTCCGGCCAGATTCCTTCAGGTTTAGGTCAGCTCCGGAATCTCAGAACAATCGATCTCAGCTACAACCAACTCACTGGAACAATCCCTCCCTCCATCGGAGCAATGCCGGAGCTAACAAACTTATTCCTCTGCCACAACCGTCTCTCCGGTTCTGTTCCCTCGTTCGCTTCCTCTTATTCCCTAACCCGGCTCGAACTCAAACACAACACTCTCTCCGGTTCGTTCGCAGAGGATTCTCTCCCTCCTTCCCTACAGTACCTCTCTTTATCATGGAACCGGTTTACTGGACCGGTGGACCGGCTATTAACCCGGCTCAACCGGCTCAACTTCCTGGACCTTAGTTTAAACCAGTTCACAGGCCCAATCCCGGCCCAACTATTCACATTCCCTCTCACAAACCTCCAACTCGAAAGAAACCAGTTCTCGGGTCCAATCCAACCGGTTAACGAGGTGACGATCCAGACCGTCGATCTCAGCTACAACCGGTTATCCGGTGAGGTGTCGCCCATGCTAGCAAGCGTGCAGAACCTGTACCTGAACAACAACGGCTTCACAGGGCAGGTTCCGGGTAGCTTCGTGGAGCGGTTACTGGCGGCGGGCATTCAGATATTGTATTTGCAGCACAATTTTTTGACCGGAATCGCGATAAGCCCGACGGCGGAGATTCCGGTGAGCAGCACCCTGTGTTTGCAGTATAACTGCATGGTGCCGCCGGTTCAGACGGCGTGCCCCTTCAACGCCGGCAAAAGGAAAATAAGACCAGCGCAGCAGTGCAACCGCTAA 1176 0.5391 MDDVAFYSLLFLCFFQSVRGILDPNDFLALQSIRKSLHDVPGSNFFSSWDFTADPCNFAGVFCADDKVIALNLGDPRAGSPGLTGKLDPSISKLSALADFTVVPGRIYGPLPQSLSQLKNLRFLGLSRNFISGQIPSGLGQLRNLRTIDLSYNQLTGTIPPSIGAMPELTNLFLCHNRLSGSVPSFASSYSLTRLELKHNTLSGSFAEDSLPPSLQYLSLSWNRFTGPVDRLLTRLNRLNFLDLSLNQFTGPIPAQLFTFPLTNLQLERNQFSGPIQPVNEVTIQTVDLSYNRLSGEVSPMLASVQNLYLNNNGFTGQVPGSFVERLLAAGIQILYLQHNFLTGIAISPTAEIPVSSTLCLQYNCMVPPVQTACPFNAGKRKIRPAQQCNR* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1260 391 PANTHER LRR RECEPTOR-LIKE KINASE 1 391 - -
Gso19g1260 391 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 1 391 - -
Gso19g1260 391 SUPERFAMILY L domain-like 37 366 - -
Gso19g1260 391 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Gso19g1260 391 Pfam Leucine Rich repeats (2 copies) 144 183 IPR025875 -
Gso19g1260 391 Gene3D Ribonuclease Inhibitor 23 210 IPR032675 -
Gso19g1260 391 Gene3D Ribonuclease Inhibitor 211 380 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1260 Gso-Chr19 41157845 41159610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1260 26 370 Receptor kinase-like Gene Family AT3G51740 34.530 3.40e-37 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1260 - - gmx:100817314 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1260 19 41157845 41159610 Gso3g1260 3 38293550 38295299 GST
Gso19g1260 19 41157845 41159610 Gso2g1251 2 15545793 15547873 PCT
Gso19g1260 19 41157845 41159610 Gso10g0202 10 2099608 2101213 PCT
Gso2g1251 2 15545793 15547873 Gso19g1260 19 41157845 41159610 PCT
Gso10g0202 10 2099608 2101213 Gso19g1260 19 41157845 41159610 PCT