Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0202 ATGGCCAAGTGCAGGAGTTCTACTTCTCCCTATGCATTGTTTGTGTTCTTCTTCTGCTTTCTACAAGTCCAGGCGATTCTGGACCCTGCCGATTTCCTCGCTCTGCAAAACATTCGTAAGGCTCTGGAAGACATGCCAGGTTCCGATTTCTTTTCCACTTGGGATTTCACCGCAGACCCATGCAACTTCGCCGGCGTTTACTGCGACTCCGACAAGATCATTGCGCTCAACCTCGGCGACCCCCGGGCGGGCTCTCCCGGCCTCACCGGCCGCCTCGACCCCGCCGTCGGCAAGCTCTCCGCGCTCGCCGAGTTCACCGTCGTCCCTGGCCGAATATACGGTCCTCTCCCCGAAACGCTCTCCGATTTGAAGAACCTCAGGTTCCTCGGCGTCAACCGCAACTTCATCTCCGGCCAAATTCCGACCAAATTAGGTGATCTCCGCAACCTCCGAACTATCGATCTCAGCTACAACCAGCTCAGCGGACGCATTCCTCCAACGGTAGGAACCTTGCCGGAGCTAACAAACCTAATCCTCTGCCATAACCGTCTCTCCGGTTCGGTCCCCCGGTTCGAGTCGCACACACTAACCCGGCTCGATCTGAAGCACAACGGTCTCTCCGGTTCGCTTCCTCCTGATTGCCTCCCTCCTTCCCTCCAGTACCTCTCTCTTTCCTGGAACCAGCTCACCGGCCCAATGGACCGCCACCTGGCCCGTCTCGACCAGCTCAACTATTTGGACCTAAGCCTGAACCAATTCACGGGCCCAATCCCGGGCCGAATATTTTCTTTCCCACTGACAAATCTTCAGTTAGAGAGGAACCAGTTCTCGGGCATGGTTCAGCCCGTGGACCAGGTTTCGATCCCGACCGTTGATCTGAGTTACAACCGGCTGTACGGTCAGATATCGCCGATGCTGGCGACAGTGCAGAATCTTTACCTGAACAACAACCGGTTCACGGGTCGGGTACCGGCTAGCTTCGTGGAGCGGTTGCTGGACGCGAGCATTCAGATACTTTACTTGCAGCATAACTATCTGACGGGGATTGAGATAAGCCCTACGGCGGTGATTCCCGAGAGAAGCTCGCTGTGTCTGCAGTATAACTGCATGGTCCCGCCCGTAGAGACTCCCTGCCCACTTAGGGCTGGTAAGGAGAAAACCAGGCCCACTGCGCAGTGCAATCAGTTGAAGGATTTGAAGGACTAA 1206 0.5605 MAKCRSSTSPYALFVFFFCFLQVQAILDPADFLALQNIRKALEDMPGSDFFSTWDFTADPCNFAGVYCDSDKIIALNLGDPRAGSPGLTGRLDPAVGKLSALAEFTVVPGRIYGPLPETLSDLKNLRFLGVNRNFISGQIPTKLGDLRNLRTIDLSYNQLSGRIPPTVGTLPELTNLILCHNRLSGSVPRFESHTLTRLDLKHNGLSGSLPPDCLPPSLQYLSLSWNQLTGPMDRHLARLDQLNYLDLSLNQFTGPIPGRIFSFPLTNLQLERNQFSGMVQPVDQVSIPTVDLSYNRLYGQISPMLATVQNLYLNNNRFTGRVPASFVERLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCLQYNCMVPPVETPCPLRAGKEKTRPTAQCNQLKDLKD* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0202 401 Pfam Leucine Rich repeat 217 231 IPR001611 GO:0005515
Gso10g0202 401 Pfam Leucine Rich repeat 193 208 IPR001611 GO:0005515
Gso10g0202 401 Pfam Leucine Rich Repeat 149 168 IPR001611 GO:0005515
Gso10g0202 401 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Gso10g0202 401 Gene3D Ribonuclease Inhibitor 30 193 IPR032675 -
Gso10g0202 401 SUPERFAMILY L domain-like 52 371 - -
Gso10g0202 401 PANTHER LRR RECEPTOR-LIKE KINASE 15 395 - -
Gso10g0202 401 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 15 395 - -
Gso10g0202 401 Gene3D Ribonuclease Inhibitor 194 371 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0202 Gso-Chr10 2099608 2101213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0202 34 327 Receptor kinase-like Gene Family AT5G62230 31.833 7.36e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0202 - - gmx:100800224 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1251 2 15545793 15547873 Gso10g0202 10 2099608 2101213 GST
Gso19g1260 19 41157845 41159610 Gso10g0202 10 2099608 2101213 PCT
Gso3g1260 3 38293550 38295299 Gso10g0202 10 2099608 2101213 PCT
Gso10g0202 10 2099608 2101213 Gso19g1260 19 41157845 41159610 PCT
Gso10g0202 10 2099608 2101213 Gso3g1260 3 38293550 38295299 PCT