Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0941 ATGGCTTCTTTTCTTTCCTTATCTCTTCCCAAATTAAACTTAATAAAGGCCTCTTCAGCAGCTAACACCAATACAACAACCACTCTTCCCACAGCTGAGACACTCAATGAGAAATTTGGCAGGAAAGGCATCAAGTTCTTGGAGTCTGATAACATTCCCATAGTTGAGCTAACAGTGAGAAATGGCAGCTCCTTGAGGCTGAGGATACCTGATGCTCATGTGACATCATACAAACCAAAAGTTAATTGGAAAGATGATGGCTTCCAGGAGGTTCTTTACACAATTCCTGCAACTGAAACTGGCCCTTACAAGGCCAAAGGTGGGGTTGGTTTGGTCATGAATGAATTGCTGCAACCTGGAGCCAAAGGGTTGCTCCCTTCCACTTTGGAGTGGACTGTAAATGATGTTGATTCTGATTCCATTGATGCTCTCCAGCTTGAATTAAGCTGCACTAGTAGATTCTTTGACATCACATACATTGTGACCCTCTATCCTGTGAGCATGGCCACAGCAGTTGTAGCTAAGAACATAGGCCCCAAGCCTGCCACTCTAACCAATGCTATTCTAAGCCATTTTAGATTCAAGAAAAGAGGTGAAACAGCAATTCAAGGCCTCAGAAGCTGCTCATATATTCCACACGCTCCTCCATCTTCTCCCTTTCAAATCTTGACCCCATCAGAAGCTACCATATCTGAGCCTCCTAGATGGTTGTCCTTTGGTAATGAGCCTGAAGCCAAGCCCGGCACGTGGGGTCAGCAAGCTTTGTCTATTACCCTCCTTGAGAATAAGATGAGTAGAGTTTATGCTGCGCCTCCAAAGGAAAGATTAAAGGCATTCTATAACACCCCTCCCTCCAAGTATGAAACCATTGATCAGGGACGTGGGCTTTGCTTCAGGGTGATAAGAATGGGTTTTGAGGATATTTATTTATCAAGCCCTGGTTCCTTGTCAGAGAAATATGGAAAGGACTACTTCATCTGCACTGGCCCTGCTTCAATACTGGTGCCTGTGACTGTAAATCCTGGTGAAGAATGGAGAGGGGCACAAGTTATTGAGCATGATAATTTAACATGA 1074 0.4432 MASFLSLSLPKLNLIKASSAANTNTTTTLPTAETLNEKFGRKGIKFLESDNIPIVELTVRNGSSLRLRIPDAHVTSYKPKVNWKDDGFQEVLYTIPATETGPYKAKGGVGLVMNELLQPGAKGLLPSTLEWTVNDVDSDSIDALQLELSCTSRFFDITYIVTLYPVSMATAVVAKNIGPKPATLTNAILSHFRFKKRGETAIQGLRSCSYIPHAPPSSPFQILTPSEATISEPPRWLSFGNEPEAKPGTWGQQALSITLLENKMSRVYAAPPKERLKAFYNTPPSKYETIDQGRGLCFRVIRMGFEDIYLSSPGSLSEKYGKDYFICTGPASILVPVTVNPGEEWRGAQVIEHDNLT* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0941 357 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 2, CHLOROPLASTIC 17 356 - -
Gso19g0941 357 Gene3D - 53 357 IPR014718 GO:0030246
Gso19g0941 357 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 17 356 - -
Gso19g0941 357 SUPERFAMILY Galactose mutarotase-like 44 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0941 Gso-Chr19 36441006 36443724 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0941 - - gmx:100788455 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0941 19 36441006 36443724 Gso16g0340 16 3858430 3861093 GST
Gso19g0941 19 36441006 36443724 Gso16g1226 16 31602291 31604939 PCT
Gso16g1226 16 31602291 31604939 Gso19g0941 19 36441006 36443724 PCT