Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1226 ATGACCATGGCTTTAAGTTCACTTTTTTTCTCCACTCGTTTCATTCCCACACCCTTTGTTACTTCCACTAGAAACATACCTTCTTCTCCACGCACTTGTGCCAGTTGCATTCCCCACAAAAGAGACTTTCCACTCCCTGCAGTGGCTTCAGTCCCTTACCAACCCATCAACTTTGACTACCTGCAAGAGGAATTCAGTGGACATGGAGTCACCTTTGAAGGAGTTGAAGACAGTTGTATTGCCAAGATGGAGCTGAAAAATGGAAGCATTGTGACCATGATGCTGCCAAGTGGATTGATCACCTCATACAAGGCCCCTATGTGGCATGGTGGCAAGTTGGAGTTGCTTCATACCAATGTGTCAGAGGGAGAGTATGGTGATGCCATCATTCAAGGAGGGGTGTCTCTAAACTTCAATTTTCAAACTGATGATGGTGAATTTTCTTGGTCTCCAACTAATTGGGTTCTGCATAAGATTCAAGGCAATGCTAATGAATCTATTCAGGTAGAATTAACAAACAGAACATCAGATGACAAGATTGGATTAAAATACATTGTGACTTTGGAAAAAGATGCCTTAAACTCGGAGGTTGAAATCTCGAACAAAAAGTCTTTACCCGTTCAGATGACAGGGTCCATCCTAAGTCATCTCACAGTAAGCTCACCAGAAGCAACTTATGCACTAGGATTAGAAAGATCAAATTACTGTAGCAAGCCCTTGTTTGAATCTGAATTTATGTTGAGTCCTCCAGATGGCCAGGAAGAAGGCTTTGGAAAAATAGTTGAGCAACTTTTTCCTCAATGGGGTACAAAAGATCAGAATAATGGATCAGAAGGTAGCCAGAGTGAAGAAATGGATGAAGAAATAGACAACTACAAGCAGTTAAGTGAGAAACTAAGTCACGTGTACACAGATGTGCCTCGAAATTTTACAGTGATTGACAGGGGTAGAAGAAATTCAGTGTCAGTTGGAAGAACTGGATTTGATGAAATGTACCTCTTCAGTCCTGGCTCAAGGGTTGAAATTTACAGCAAGTATTCTTACATATGTGTTGGCCAAGCTGCCATCCTCAAACCAATAATACTAAGTCCTGAAGATGTATGGAGAGGTGGGCAGTATATACACAATCCAAATCTTGATGCGTAA 1146 0.4145 MTMALSSLFFSTRFIPTPFVTSTRNIPSSPRTCASCIPHKRDFPLPAVASVPYQPINFDYLQEEFSGHGVTFEGVEDSCIAKMELKNGSIVTMMLPSGLITSYKAPMWHGGKLELLHTNVSEGEYGDAIIQGGVSLNFNFQTDDGEFSWSPTNWVLHKIQGNANESIQVELTNRTSDDKIGLKYIVTLEKDALNSEVEISNKKSLPVQMTGSILSHLTVSSPEATYALGLERSNYCSKPLFESEFMLSPPDGQEEGFGKIVEQLFPQWGTKDQNNGSEGSQSEEMDEEIDNYKQLSEKLSHVYTDVPRNFTVIDRGRRNSVSVGRTGFDEMYLFSPGSRVEIYSKYSYICVGQAAILKPIILSPEDVWRGGQYIHNPNLDA* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1226 381 SUPERFAMILY Galactose mutarotase-like 85 374 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gso16g1226 381 MobiDBLite consensus disorder prediction 269 289 - -
Gso16g1226 381 Gene3D - 75 379 IPR014718 GO:0030246
Gso16g1226 381 PANTHER PROTEIN NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 35 379 - -
Gso16g1226 381 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 35 379 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1226 - - gmx:100775728 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0941 19 36441006 36443724 Gso16g1226 16 31602291 31604939 PCT
Gso16g0340 16 3858430 3861093 Gso16g1226 16 31602291 31604939 PCT
Gso16g1226 16 31602291 31604939 Gso19g0941 19 36441006 36443724 PCT
Gso16g1226 16 31602291 31604939 Gso16g0340 16 3858430 3861093 PCT