Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0340 ATGGCTTCTTTTCTTTCCTTATCTCTTCCCAAGTTAAACTTAATAAAGGCCTCTTCAGCAGCTAACACCACTACAACAACAACAACCACTCTTCCCACAGCTGAGACACTCAATGAGAAATTTGGCAGAAAAGGCATCAAGTTCTTGGAGTCTGATAACACTCCCATAGTTGACTTAACAGTGAGAAATGGCAGCTCCTTGAGGCTGAGGATACCTGATGCTCATGTGACATCATACAAACCAAAAGTTAATTGGAAAGATGATGGATTTCAGGAGGTTCTTTACACAATTCCTGCAACTGAAACTGGCCCTTACAAGGCCAAAGGTGGTGTTGGTTTGGTCATGAATGAAGTGCTGCAACCTGGAGCCAAAGGGTTACTACCTTCCACTTTAGAGTGGACTGTAAATGATGTTGACTCTGATTCCATAGATGCTCTCCAGGTTGAATTGAGCTGCACTAGTAGATTCTTTGACATCACTTACATAGTGACCCTCTATCCTGTGAGTATGGCCACAGCAGTTGTAGCCAAGAACATTGGCCCCAAGCCTGCCACTCTAACCAATGCTATTCTAAGCCATTTTAGATTCAAGAACAGACGTGGGACAGCAATTAAAGGCCTCAGAAGCTGCTCATATATTCCACATGCTCCTCTTTCTTCTCCCTTTCAAATCTTGACTCCATCAGAAGCTACCATATCTGAGCCTCCTAGATGGCTTTCCTTTGGTAATGAGACTGAAGCCAAGCCTGGCACGTGGGGTCAGCAGGCTTTGTCTATTACCCTCCTTGAGAATAAGATGAGTAGAGTTTATGCTGCACCTCCAAAAGAAAGATTAAAGGCATTCTATAACACCCCTCCTTCCAAGTATGAAACCATTGACCAGGGACGTGGGCTATGCTTCAGGGTGATAAGAATGGGTTTTGAGGATATTTATTTATCAAGCCCTGGTTCCTTGTCAGAGAAATATGGAAAGGACTACTTCATCTGCACTGGCCCTGCTTCAATACTGGTGCCTGTGACTGTTAATCCTGGGGAAGAATGGAGAGGTGCACAAGTTATTGAGCATGATAATTTGACATGA 1080 0.438 MASFLSLSLPKLNLIKASSAANTTTTTTTTLPTAETLNEKFGRKGIKFLESDNTPIVDLTVRNGSSLRLRIPDAHVTSYKPKVNWKDDGFQEVLYTIPATETGPYKAKGGVGLVMNEVLQPGAKGLLPSTLEWTVNDVDSDSIDALQVELSCTSRFFDITYIVTLYPVSMATAVVAKNIGPKPATLTNAILSHFRFKNRRGTAIKGLRSCSYIPHAPLSSPFQILTPSEATISEPPRWLSFGNETEAKPGTWGQQALSITLLENKMSRVYAAPPKERLKAFYNTPPSKYETIDQGRGLCFRVIRMGFEDIYLSSPGSLSEKYGKDYFICTGPASILVPVTVNPGEEWRGAQVIEHDNLT* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0340 359 Gene3D - 51 359 IPR014718 GO:0030246
Gso16g0340 359 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 2, CHLOROPLASTIC 17 358 - -
Gso16g0340 359 SUPERFAMILY Galactose mutarotase-like 64 353 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gso16g0340 359 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 17 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0340 Gso-Chr16 3858430 3861093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0340 - - gmx:100805680 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0941 19 36441006 36443724 Gso16g0340 16 3858430 3861093 GST
Gso16g0340 16 3858430 3861093 Gso16g1226 16 31602291 31604939 PCT
Gso16g1226 16 31602291 31604939 Gso16g0340 16 3858430 3861093 PCT