Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0940 ATGGGTAGGAGTCTCAGCCCTTTGGTGAGGCAAGAGCTGGCAAATCTTGAGAAAGATGAAGATAGCCGCAAATCCGCCATGAAGGCGTTGAAATCCTATGTGAAAGATTTGGATTATAAGGCCATTCCTTTCTTTCTTGCAAAAGTTTCTGAGAGCAAGGAAAATTGTTCAGGGGAGTTCACAATTTCAATCTATGAAGTTCTTGCACGGGTTCACGGTGTCAAAATTGTTCCCTTGATAGACAGCATCATGAGAACTATAGTCAAGACTTTGGCTTCAAGTGCAGGGTCCTTCCCTCTCCAACAGGCTTGCTCAAAGGTGGTTCCTGCAATTGCAAGATATGGAATTGACCCCTCAACCCCAGAAGATAAAAAGAGGCACATTATTCAGTCCCTTTGCTCGCCTCTTTCTGATTCCCTTTCGAGTTCTCAGGAGAGTCTTACTTCGGGTGCTGCTCTTTGCTTGAAGGCTCTGGTGGATTCTGAAAATTGGAGGTTTGCTTCAGATGAGTTGGTCAATAGGGTTTGCCAGAATGTTGCTGTGGCATTAGATGGAAAGTCTGGTCAAACCAACTCACACATGGGCCTAGTTATGTCGTTGGCCAAGCGCAATGCTTTGATCATTGAAGCGTATGCAAGGTTGCTAGTACAATCTGGAATAAGAATACTGAATGCTGGCCTTGTGGAGGGGAATTCTCAGAAAAGGCTTTCATCCATTCAGATGATCAACTACTTGATGAGAAGTTTGGACTCTAGAAGCATATTCTCAGAGATTGAATTGATAATTGAGGAGATGGACAAGTGCCAATCTGATAAAATGGCATTTGTGCAAGGTGCGGCACTTGAGGCTTTGCAAACTGCCAAGAGAATTGCAAGTGATAAAAAACCAAGATATGCTAAAAGTCCTGCTTCAGTGACAGGATCAAACTTTAGTAGGAGAGAAGAAGACTATATGGAGGGAGAGAATACTTCTTCTGGTGAAGGAGAACATACTCCTTCCTCTCTTACACCAGAATCGAGTACATTCGACTTTTTCTCTGGATATGAATCTGTTGGGTCTCCTATTTCAAGCAACTTAGACTATGGACAAAGAAGCGTGACTAGGAAGCTTTGGAGTAATGAAAATGGAGGGGTTGATGTTTCTCTGAAGGATGGCTTGTTTTCACAAGTAGGAAAAGAAGGTGCTTTGTTAGAGCATTCATTGATTCACGAGTTTTCTAATGGAGAGGGAGACTATACAGAGGAGTTTGCTGGTTTCATGGGCAGAAATACCAGGCATGGAGTATCCAAAAGTACCACCACAAGTCCACTAAGGTCACACACTCAGGCAACTGTTGACAGCATAAAAATCTTTGAGACCCCTAGGAAGCTCATCCACTCTCTTCAAGATTCAAGTGATGTGTCTTTGGGTTGCTCTAAGAAGCAGAATAGAAGGTATAGAAGTCTATCCTCAGACAACATTGAGTGGAGTCCAGCTTCTAAATACGACCAAAACGGTTTCGCAGATGACACGAACAAGTGTGACAGTGAAGTAATTGAAGGTTGTGCTGAGGTTGAGTTCCAAGGTAGCTCAGAGTCAGTCTCATCAACAGATGACATTCCTGCAGATGCCGATAAGCAGATGCATACCGAAGTGGTTCCTGTAAACAGAAATGCTAAGACTACATATAAATTGGTTTGTGGTCTTTCATGTGTTCTACTTGCAGTGGCCACTCCATTGCTTTGGATCAATAGTCAGGATGAAGGTCATTATCTTGTGCCAACATAA 1767 0.4301 MGRSLSPLVRQELANLEKDEDSRKSAMKALKSYVKDLDYKAIPFFLAKVSESKENCSGEFTISIYEVLARVHGVKIVPLIDSIMRTIVKTLASSAGSFPLQQACSKVVPAIARYGIDPSTPEDKKRHIIQSLCSPLSDSLSSSQESLTSGAALCLKALVDSENWRFASDELVNRVCQNVAVALDGKSGQTNSHMGLVMSLAKRNALIIEAYARLLVQSGIRILNAGLVEGNSQKRLSSIQMINYLMRSLDSRSIFSEIELIIEEMDKCQSDKMAFVQGAALEALQTAKRIASDKKPRYAKSPASVTGSNFSRREEDYMEGENTSSGEGEHTPSSLTPESSTFDFFSGYESVGSPISSNLDYGQRSVTRKLWSNENGGVDVSLKDGLFSQVGKEGALLEHSLIHEFSNGEGDYTEEFAGFMGRNTRHGVSKSTTTSPLRSHTQATVDSIKIFETPRKLIHSLQDSSDVSLGCSKKQNRRYRSLSSDNIEWSPASKYDQNGFADDTNKCDSEVIEGCAEVEFQGSSESVSSTDDIPADADKQMHTEVVPVNRNAKTTYKLVCGLSCVLLAVATPLLWINSQDEGHYLVPT* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0940 588 PANTHER PROTEIN SINE1 1 588 - -
Gso19g0940 588 MobiDBLite consensus disorder prediction 295 339 - -
Gso19g0940 588 SUPERFAMILY ARM repeat 18 290 IPR016024 -
Gso19g0940 588 MobiDBLite consensus disorder prediction 324 339 - -
Gso19g0940 588 Gene3D - 3 319 IPR011989 -
Gso19g0940 588 PANTHER GEMIN2 1 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0940 Gso-Chr19 36435791 36439123 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0940 - - gmx:102659858 1120.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0940 19 36435791 36439123 Gso16g0341 16 3862779 3865990 GST
Gso19g0940 19 36435791 36439123 Gso16g1225 16 31597125 31600881 PCT
Gso19g0940 19 36435791 36439123 Gso2g0595 2 6208489 6212149 PCT
Gso16g1225 16 31597125 31600881 Gso19g0940 19 36435791 36439123 PCT
Gso2g0595 2 6208489 6212149 Gso19g0940 19 36435791 36439123 PCT