Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0341 ATGGGTAGGAGTCTAAGCCCTTTGGTGAGGCAAGAGCTGGCAAATCTTGAGAAAGATGAAGATAGCCGCAAATCCGCCATGAAGGCGTTGAAATCTTATGTGAAAGATTTGGATTTAGAGGCCATTCCTTTCTTTCTCGCAAAAGTTTCTGAGAGCAAAGAAAATTGTTCAGGGGAGTTCACAATTTCAATCTTTGAAGTTCTTGCTAGGGTTCACGGTGTCAAAATTGTTCCTTTGATAGACAACATCATGAGAACCATAGTAAAGACTTTGGCTTCAAGTGCAGGGTCCTTCCCTCTCCAACAGGCTTGCTCAAAGGTGGTTCCTGCAGTTGCAAGATATGGAATTGACCCCTCAACCCCAGAAGACAAAAGGAGGCACATAATTTGGTCCCTTTGCACGCCTCTTTCCAATTCTCTCTCGAGTTCTCAGGAGAGCCTTACTTCGGGTGCTGCCCTTTGCTTGAAGGCTCTGGTGGATTCTGATAATTGGAGGTTTGCTTCAGATGAATTGGTCAATCGGGTTTGCCAGAATGTTGCTGCGGCATTAGATGGAAAGTCTGGTCAAACCAACTCCCATCTTGGTCTGGTTATGTCGTTGGCCAGGCGCAATGCGTTGATCATTGAAGCGTATGCAAGGTTGCTCATACAATCTGGAATAAGAATACTGAATGCTGGCCTTGTGGAGGGGAATTCTCAGAAAAGGCTTTCATCAATTCAGATGATCAACTACTTGATGAGAAGTTTGGACTCCAGAAGCATATTCTCAGAGATTGAATTGATAATTGAGGAGATGGACAAGTGCCAATCTGATAAAATGGCATTTGTGCAAGGTGCAGCACTTGAGGCTTTGCAAACTGCCAAGAGAATTGCAAGTGATAAAAAGCCAAGATATGCAAAAAGTCCGGCTTCAGTGACAGGATCAAATTTTAGTAGGAGAGAGGAAGACTATATGGAGGGAGAGAATACTTCTTCTGGTGATGGAGAACATACTCCTTCTTCTCTTACACCTGAATCGCGGACATTTGACTTTTTCCCTGGATATGAATATGTTGATTCTCCTATTTCAAGCAACTTTGGACGAAGAAGTGTGACTAGGAAGCTTTGGAGTAATGAAAATGGAGGAGTTGATGTGTCTCTAAAGGATGGTTTGTTTTCACAAATAGGAAAAGAAAGTGCTTTGTTAGAGCATTCATTGATTCCAGAGTTTTCTGATGGAGAGGGAGACTATACAGAGGAGTTTGCTGGTTTCATGGGCAGAAATACCAGCCATGGAGTGTCCAAAAGTACCACCACAAGTCCACTAAGGTCACGCACTCAGGCAACTGTTGACAGCATAAAAATCTTTGAGACCCCTAGGAAGCTCATCCACTCTCTTCAAGATTCAAGTGATCTGTCTTTGGGTTGCTCTAAGAAGGAGCAGAATGGAAGGTATAGGAGTCTATCCTCAGACGACAACATGGAGTGGAGTCCATCTTGTAAGTATAACCAAAACGGTTTCTCAGATGACATGAACAAGTGTGATAGCGAAGTAATCGAAGGTTGTGCTGAGGTTGAGTTTCAAGGTGGCTCAGAGTCAGTCTCATCAACAAATGACAACAACATTCTTGTAGATGTCGAAAAGCAGATGCATACCAAAGTGGTTCCTGAAAATAGAAATGCCAAGACTAAATACAAATTGGTTTGTGGTCTTTCATGCGTTCTACTTGCAGTGGCTACTCCATTGCTTTGGATCAATAATCAAGATGAAGGCCATTATCTTGTCCCAACATAA 1773 0.4287 MGRSLSPLVRQELANLEKDEDSRKSAMKALKSYVKDLDLEAIPFFLAKVSESKENCSGEFTISIFEVLARVHGVKIVPLIDNIMRTIVKTLASSAGSFPLQQACSKVVPAVARYGIDPSTPEDKRRHIIWSLCTPLSNSLSSSQESLTSGAALCLKALVDSDNWRFASDELVNRVCQNVAAALDGKSGQTNSHLGLVMSLARRNALIIEAYARLLIQSGIRILNAGLVEGNSQKRLSSIQMINYLMRSLDSRSIFSEIELIIEEMDKCQSDKMAFVQGAALEALQTAKRIASDKKPRYAKSPASVTGSNFSRREEDYMEGENTSSGDGEHTPSSLTPESRTFDFFPGYEYVDSPISSNFGRRSVTRKLWSNENGGVDVSLKDGLFSQIGKESALLEHSLIPEFSDGEGDYTEEFAGFMGRNTSHGVSKSTTTSPLRSRTQATVDSIKIFETPRKLIHSLQDSSDLSLGCSKKEQNGRYRSLSSDDNMEWSPSCKYNQNGFSDDMNKCDSEVIEGCAEVEFQGGSESVSSTNDNNILVDVEKQMHTKVVPENRNAKTKYKLVCGLSCVLLAVATPLLWINNQDEGHYLVPT* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0341 590 PANTHER PROTEIN SINE1 1 590 - -
Gso16g0341 590 MobiDBLite consensus disorder prediction 295 338 - -
Gso16g0341 590 Gene3D - 3 319 IPR011989 -
Gso16g0341 590 SUPERFAMILY ARM repeat 11 286 IPR016024 -
Gso16g0341 590 MobiDBLite consensus disorder prediction 324 338 - -
Gso16g0341 590 PANTHER GEMIN2 1 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0341 Gso-Chr16 3862779 3865990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0341 - - gmx:100782340 1131.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0940 19 36435791 36439123 Gso16g0341 16 3862779 3865990 GST
Gso16g0341 16 3862779 3865990 Gso16g1225 16 31597125 31600881 PCT
Gso16g0341 16 3862779 3865990 Gso2g0595 2 6208489 6212149 PCT
Gso16g1225 16 31597125 31600881 Gso16g0341 16 3862779 3865990 PCT
Gso2g0595 2 6208489 6212149 Gso16g0341 16 3862779 3865990 PCT