Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1225 ATGGGAAGGGGTCTGAGTCCAATGCTACAGAGAGAGATCCAAAATCTTGACAAAGATGGGGATAGCCGCAAATCCGCAATGAGAGCATTGAAGTCATATGTGAAAGATTTGGACATGAAGACAATACCCATCTTTCTTGCACAAGTTTCTGAGACCAAGGAAACTGGTTCTTTGTCTGGAGAGTTCACAATTTCACTGTATGAGGTTCTTGCTCGTGTTCATGGAGTCAAGATTGTTCCCATGATAGACAGCATTATGCAATCCATAGTTCAGACCTTAGCTTCAAGTGCAGGGTCTTTTCCTCTTCAGCAGGCTTGCTCAAAAGTGGTTCCAGCCATAGCAAGGTATGGAATTGACCCCACAACCCCTGAAGAGAAGAAGAGGCAAATAATTCACTCTCTTTGTAAGCCTCTTTCAGACTCTCTCTTGAGTTCTCAAGAGAGTTTGACATGTGGTGCGGCCCTTTGCTTGAAGGCCCTTGTGGATTCTGATAACTGGCGTTTTGCTTCAGATGAGATGGTTAATAGGGTGTGCCGGAATGTTGCTGTGGCATTAGAGGGAAAGTCCGCACAAACCAATTCACACATGGGTCTGGTTATGACCCTGGCGAAGCGCAATGCTTTGATTGTTGAAGCCTACGCTAGATTGTTCATACAATCTGCACTGAGAATACTAAATGCTGGCAGTGAGCCTTTGGAGGGGAATTCTCAGAAGCGGTTTGTAGCCATTCAAATGGTGAACTTCTTGATGAAATGTTTAGATCCAAGGAGCTTATTTTCAGAAGTTGAACAGATAATTGAGGTGATGGAGCTGTGTCAATCAGACAAAATGGCATATGTCAAAGGAGCTGCATTTGAGGCTTTGCAAACTGCTAAGATAATTGTCACTGATAAAAAATCAAGAGGTGTGAAGAGTCCTGCTTCTATGACAGGTTCGAATTTCAGTAGAAAAGACTATATGGAAGGTGAAAGTTTTTCTGGTGATGGAGATCGTTCTCTCTCATCTATTTCTCCAGAGTCACAGACCTTGGACTTCTTCAATGGATATGCATCGCCTATTGAGTCTCCCATTTCAACAAGTCGGCCTTCGCATAACTTCTACGAGAGGAGTGTGAATAGGAAGCTTTGGAGTCATGAAAATGGAGGGGTTGATGTGTCTCTCAAGGATGGTTTGTTCTCAAAATCAGGGCACAGAAATGCCTCGTTGGACCACAGTCACTACACTATGGATCATGAGTTTTCTAATGGAGGGGGAGATTTAACAGGGGAGTTTGCTGGTTTCATGCACAAAAGTCCTTGGCACGGAGCATCTAGAAGTGCCAGCACAAGTCCCCTAAGATCATGCACGCAGGGCAACATTAAAATCTTTATGACTCCTAGGAAACTCATTCACTCTCTTCAAGAAGACCTAAATGATGAGATTTCAGATTGCTCTGAGAAACCAAATAGAAGGATCAAGAGTCTATCATCAGGCAATATTAAGTGGAGTCCGGCATCTTATTCTAAATATGATCAAAATGGTATTGCAGATCATGTCAACTATGATTCTAAAGAGAGTGGAAGCTTGTATGGTAATGGTGACATTCAGTTTCAAGGTGGGCCGGAGTCAGTCTCATCCACAGATGACATTCCTGGTAATACTGATCTGCAGAGGCCTTCTGAGGTTGGTCCTGAAAGTAGAAATGGTACCGAAACTGTTCTCATGGAAAAGCCATTTCAAAAGACCACACATAAATTAGTTTGTGGCATTTCGTTTGCTCTTTTGGCAATAGCTACTCCTTTACTCTGGATCAACAGTCAGGACGAAGGCCATTTTCTTGTCCCTACATAA 1830 0.4306 MGRGLSPMLQREIQNLDKDGDSRKSAMRALKSYVKDLDMKTIPIFLAQVSETKETGSLSGEFTISLYEVLARVHGVKIVPMIDSIMQSIVQTLASSAGSFPLQQACSKVVPAIARYGIDPTTPEEKKRQIIHSLCKPLSDSLLSSQESLTCGAALCLKALVDSDNWRFASDEMVNRVCRNVAVALEGKSAQTNSHMGLVMTLAKRNALIVEAYARLFIQSALRILNAGSEPLEGNSQKRFVAIQMVNFLMKCLDPRSLFSEVEQIIEVMELCQSDKMAYVKGAAFEALQTAKIIVTDKKSRGVKSPASMTGSNFSRKDYMEGESFSGDGDRSLSSISPESQTLDFFNGYASPIESPISTSRPSHNFYERSVNRKLWSHENGGVDVSLKDGLFSKSGHRNASLDHSHYTMDHEFSNGGGDLTGEFAGFMHKSPWHGASRSASTSPLRSCTQGNIKIFMTPRKLIHSLQEDLNDEISDCSEKPNRRIKSLSSGNIKWSPASYSKYDQNGIADHVNYDSKESGSLYGNGDIQFQGGPESVSSTDDIPGNTDLQRPSEVGPESRNGTETVLMEKPFQKTTHKLVCGISFALLAIATPLLWINSQDEGHFLVPT* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1225 609 PANTHER PROTEIN SINE1 1 609 - -
Gso16g1225 609 PANTHER GEMIN2 1 609 - -
Gso16g1225 609 SUPERFAMILY ARM repeat 17 291 IPR016024 -
Gso16g1225 609 Gene3D - 5 303 IPR011989 -
Gso16g1225 609 MobiDBLite consensus disorder prediction 523 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1225 Gso-Chr16 31597125 31600881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1225 - - gmx:100820627 1202.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1225 16 31597125 31600881 Gso2g0595 2 6208489 6212149 GST
Gso19g0940 19 36435791 36439123 Gso16g1225 16 31597125 31600881 PCT
Gso16g0341 16 3862779 3865990 Gso16g1225 16 31597125 31600881 PCT
Gso16g1225 16 31597125 31600881 Gso19g0940 19 36435791 36439123 PCT
Gso16g1225 16 31597125 31600881 Gso16g0341 16 3862779 3865990 PCT