Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0913 ATGGAGGTACATTCTCCTGTCGGGGCCAAGAGATTATGGAATGTGTTGAGGGTAACCTTCTTCATGATAAGGAAGGGTTTGATCTCAAAGAGAAAGATGATCATGGACATGAATTTGATGATGAAGAAAGGAAAGGTGGTGAGAAAATCACTTAGCAATCTCATGTCATCACATCACCACCACCACAACCCTAAGAGCGTCACACGTGGCGGCGCCGCCTTAGGGGTGCATTATGAATTCTCTTGTAACAGTAGTCCAAATCCAATTTTTTTCAACATGCCAAAGCGCAAGCACCACTTCAACTTCCCCTGCATCCATGCCCCTGAGGTTCTCGAAGAGGAAGAAGAAACTGATTTTTCATTAGAAGTTGAAAGTGATGTGCCTAAGGCTGTGGTCACCGTGCCCAAAACCCCAGAATACGTGTACAACTTTTTTGTTGAGAAAAAGAGTCCTCTTCTCTCACCGTTCTCTGTGAGGGTCTCCAATTACTCTGCATTGGATGAAAATGAAGACATTGGAAATGACCATGTTGATGATCAAGCTGAGGATTTCATCAGAAGGTTCTATGAACAGCTTAGGACGCAAAGCCCAGTGCAATTCCTGCGTTACCAGGAGATGTAA 621 0.4428 MEVHSPVGAKRLWNVLRVTFFMIRKGLISKRKMIMDMNLMMKKGKVVRKSLSNLMSSHHHHHNPKSVTRGGAALGVHYEFSCNSSPNPIFFNMPKRKHHFNFPCIHAPEVLEEEEETDFSLEVESDVPKAVVTVPKTPEYVYNFFVEKKSPLLSPFSVRVSNYSALDENEDIGNDHVDDQAEDFIRRFYEQLRTQSPVQFLRYQEM* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0913 206 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 206 - -
Gso19g0913 206 Pfam Cotton fibre expressed protein 175 206 IPR008480 -
Gso19g0913 206 PANTHER OS01G0930500 PROTEIN 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0913 Gso-Chr19 35743522 35744589 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0913 - - gmx:100806803 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1201 16 31263050 31264150 Gso19g0913 19 35743522 35744589 GST
Gso16g0374 16 4255566 4256629 Gso19g0913 19 35743522 35744589 PCT
Gso19g0913 19 35743522 35744589 Gso16g0374 16 4255566 4256629 PCT