Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0374 ATGGAGGTACATTCTCCCGTTGTGGCCAAGAGATTATGGAATGTGTTGAGGGTAACCTTCTTCATGATAAGGAAGGGTTTGATCTCAAAGAGAAAGATGATCATGGATATGAATTTGATGATGAAGAAAGGGAAGGTGGTGAGAAAATCTCTTAGCAATCTCATGTCTTCACATCACCACCACCACAACCATAAGAGCGTGACACATGGCGGCGGCTTAGGGGTGCATTATGAATTCTCATGTAACAATAGTCCAAATCTAAATTTTTTCAACATGCCAAAGCGCAAGCACCATTTCAACTTCCCCTGCATCCATGCCCCAGAGGTTCTAGAGGAGGAATTAGAAGAACATGATTTTTCATTCGAAGTTGAAAGTGATGTTGTGCCTAATAAGGCTGTGGTCACCGTGCCCAAGACCCCAGAATACATGTACAACTTTCTTGTTGAGAAAAAGAGTCCTCTTCTCTCACCATTCTCTGTGAGGGTCTCCAATTACTCTGCATTGGATGAAAATGAAGACATTGGAAATGACCATGTCGATGATCAGGCTGAGGATTTCATCAGAAGGTTCTATGAACAGCTTAGGACGCAAAGCCCCGTGCAATTCCTCCGTTACCAAGAGATGTAA 627 0.4306 MEVHSPVVAKRLWNVLRVTFFMIRKGLISKRKMIMDMNLMMKKGKVVRKSLSNLMSSHHHHHNHKSVTHGGGLGVHYEFSCNNSPNLNFFNMPKRKHHFNFPCIHAPEVLEEELEEHDFSFEVESDVVPNKAVVTVPKTPEYMYNFLVEKKSPLLSPFSVRVSNYSALDENEDIGNDHVDDQAEDFIRRFYEQLRTQSPVQFLRYQEM* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0374 208 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 208 - -
Gso16g0374 208 PANTHER OS01G0930500 PROTEIN 1 208 - -
Gso16g0374 208 Pfam Cotton fibre expressed protein 177 208 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0374 Gso-Chr16 4255566 4256629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0374 - - gmx:100790324 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0374 16 4255566 4256629 Gso16g1201 16 31263050 31264150 PCT
Gso16g0374 16 4255566 4256629 Gso19g0913 19 35743522 35744589 PCT
Gso16g1201 16 31263050 31264150 Gso16g0374 16 4255566 4256629 PCT
Gso19g0913 19 35743522 35744589 Gso16g0374 16 4255566 4256629 PCT