Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1201 ATGGAGGCACATTCTCCAGTTATAGCCAAGAAGCTATGGAATGTGTTGAGGATCACTTTCTTCATGATCAGGAAGGGTTTGGTGTCAAAGAGGAAGCTGATTATGGACATGAATTTGATGATGAAGAAAGGGAAATTGCTCAGAAAATCTATGAGCAATTTCATGTCATCTCATCACCACCACCATCATCATCATTCAAAGAGTTTGGCACGTGGCTATGGCATGCAGGAATATGAATTCTCATGCAGCAACAGCCCAAGTCCTGTTTTTTTCCATGTGCCAAAGAAGAAGCACCATTTCAACTTCCCTTGCATGAATACCACAGAGGTTGTTGAAGAGCCTAGGCCCGTGGTTTTGGTGCCTAATATGACACCTGAATACACTTTCAACCATAGGTTTGATAATGCATCTGATTTTGCTCCTGGGGAGAGGATCTCACCCTTCACTGTGAGGATCTCCAACTACTCATCTGAGGATGAAGAAAATGAACAAGAGGGTGGAAATGGAAATGCCCAAGTTGATGATCAGGCTGAGGCTTTCATCAGAAGGTTCTATGAACAGCTGAGAATGCAAAGCCGAATGCAGTTGCTGGAGTACCAAGAGATGTGA 609 0.4351 MEAHSPVIAKKLWNVLRITFFMIRKGLVSKRKLIMDMNLMMKKGKLLRKSMSNFMSSHHHHHHHHSKSLARGYGMQEYEFSCSNSPSPVFFHVPKKKHHFNFPCMNTTEVVEEPRPVVLVPNMTPEYTFNHRFDNASDFAPGERISPFTVRISNYSSEDEENEQEGGNGNAQVDDQAEAFIRRFYEQLRMQSRMQLLEYQEM* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1201 202 Pfam Cotton fibre expressed protein 172 202 IPR008480 -
Gso16g1201 202 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 202 - -
Gso16g1201 202 PANTHER OS01G0930500 PROTEIN 1 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1201 Gso-Chr16 31263050 31264150 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1201 - - gmx:100783425 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1201 16 31263050 31264150 Gso19g0913 19 35743522 35744589 GST
Gso16g0374 16 4255566 4256629 Gso16g1201 16 31263050 31264150 PCT
Gso16g1201 16 31263050 31264150 Gso16g0374 16 4255566 4256629 PCT