LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso19g0763	ATGAAAGGAAAGAACAGGAGAAGTGGTGGTGTTGTCCATATGGAATACCTCATTCACATTCAGGAGATTAAGCCTTGGCCCCCATCACAATCTCTCAGATCGCTTCGTTCTGTGTTGATACAATGGGAGAATGGTGATCGCTCTTCAGGGTCTACTGGTGTTGTTTCACCTTCGCTTGGTCCTAATTCTGCTCCTGGTGAGGCAAAACTCGAGTTTAATGAGTCATTTAGGCTTCCTGTAACTCTGTCAAGGGATATGTCTATTCGAAATAGTACTGCTGCTGTGTTCCAGAAGAATTGTTTGGAGTTTCACTTGCATGAAACTCGAAGAGATAAGACCACTAAAGGGCAGTTGCTGGGGACTGCCATCATAGACTTGGCAGATTGTGGTGTACTTAGAGAGACCTTGAGCATTCGTACGCCATTGAACTGCCAGAGGAACTACAGAAACACAGATCAGCCACTTTTGTTCATTCAAATTGAGCCTGTTGAAAAGAGTCGCCCTAAGTCCTCCTTGAAGGACAGCTTGACAAAGGGAAATAATGGCAGTGAATCTGTATCAGCATTGATGAATGGAGAGTATGCTGAGGAAGCTGAGATCACCTCTTTTACTGATGACGATGTTTCCTCTCATTCATCTGTGGCCGCAGTCACTACTTCCTCGGAGTCTAGTGCGTGTATGCCCCCCGAACATGAAGAGAATGGACCAGCTCAAAACAGTGGTAGCAATGACAAGGAGCATGAGCATCCCTTGACCTCAGAGACAAGAGTTGAGAAGTTGAATGTGATGGAACAAGATGCATATGAGAGACTGGAGAGGAGTTCTTCCTATGTGTCATCTATGGATGTGTCCTCTGAAGTCGGGAGTCCAGTAAATGGTCATACCTCTATTACAAGCACTCCCAATCATAGATCAGCAACAACCCCAAAGCAGGTTGCTTCTTTGAATGCTGATTCTTCTTCCCCAACCTTGGAGGAAAATTCTAAGAGCAGGTCCAGAATCAGTGATGATGAAAATTTGGATCAGGAGAGTTGTGAAAAAGTTGCCAATTGTAGAAATATGAGTACAGTTGTACAAAGAAACAATAACGAAAGTGATTTTGACATTTATTCTAGCAACACTACGTCTCTAGACAGTAATTACCTCGTGGACACGAATCCAAGCTTTGGTTTGGAAACCAAAGACAAATTAAGTGAGAGTTGTGAGGAAGTTGACAAAAGCCGTGTGCTGGAGGGGGGAAGTGATAACTATTACAGTTCCATTCAAGATCAGCATGGAAATGAAATGTTTCATTCTGATAAGCAATATCATGTAGAAGATGAATCAGTGGCAGAAGGTTCAAAAGATCAAGTTTTATTGAGTAGCAATTCATATTCTTTTGGTGGGTCAGATAATGGTATGAAAGGCAATGTTCTGAAAAATGAAAGATTGAAGAATGTGAGGTCTGTAAGGTCATCAGCAGACTCAGTTAGGAATATTGGGTCACTTGGTAACAATCATCTCATTGAGGTAAAGGAAAATGGTGTTAATGGAGATGCCCAAAATAATGGAGCGAACATTCGAAGCAGTGACAGAAAAGATGCCAAGGTTTATCCAAGGGAAGCCAGAAATGCCATTTTAGACAACAAGATTGAGCACTTGGAAAACAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCTGCTATTGAGGCTGCTTTATATTCAGTAGTTGCTGAGCATGGAAGCTCCATGAGTAAGGTTCATGCCCCAGCTCGGCGCCTTTCAAGGCTGTACCTTCATGCTTGTAAAGAAAATTTTCAAGCAAGAAGGGCTGGGGCAGCTAAAAGTGCTGTTTCTGGGTTAGTCCTTGTTGCAAAGGCATGTGGAAATGATGTCCCAAGGTTGACATTTTGGTTGTCTAATTCTATTGTGCTGAGAACAATTATAAGCAAAACTACCAAAGGCATGACACCATCTAATCCTTCTGGATCTAGTACAAGAAGGAGGAATGGAGAAGGGAATGGCAAGGTAACACAACCATTACTATGGAGGGGGTTCTCTCCTAGGAAAAACGAAAATACAGCTTTTGAATATGGAGGTATAGGTAGCTGGGATGACCCAAATATGTTCACATCAGCATTGGAAAAGGTGGAAGCTTGGATCTTCTCTCGCATTGTGGAATCTATTTGGTGGCAGTCTTTGACTCCACATATGCAGCTTGCTGATGCAAAGGCCACTTGTAAGGATTCAGCGAAAAACTATAAAAATATGTCTAGCTCATGTGATCAAGAGCAGGGGAATTTATCACTAGGTATTTGGAAGAATGCATTTAGAGAAGCCTGTGAAAGGCTTTGTCCTATCCGAGCTGGAGGTCACGAGTGTGGCTGTTTATCTGTGCTGCCTAGATTGATAATGGAGCAGTGTGTGGCAAGATTAGATGTTGCTATGTTCAATGCCATTCTTCGGGAATCTGATGATGATATTCCAACTGATCCTGTATCTGATCCCATTAGTGATCCCAAGGTTCTCCCCATTCCACCTGGTCAATCAAGCTTCGGAGCTGGTGCGCAGCTAAAAACTGCGATTGGTAACTGGTCTAGATGGCTGACTGACCTATTTGGTATGGATGATGATGACCCACTTGAGGATAGAGATGAAAATGACCTTGATAGCAATGATGGAAGTCAAAATACCTTAAAGTCCTTTCATCTTCTTAATGCATTAAGCGACCTCCTGATGCTTCCTAAGGATATGCTCTTAAATGCATCCATCAGGAAAGAGGTGTGTCCAATGTTTAGTGCATCACTAATCAAGAAGATTTTAGACAATTTTGTCCCAGATGAATTTTGCCCTGATCCAATTCCCACTGATGTTTTTGAAGCTCTGGACTCACAGGATGATCTTGAGGATGAAAATGAGTCTATCAACAACTTCCCCTGCAATGCAGCTCCCATTGCATATTCCCCTCCATCATCAACTACCATTACAAGTATTACTGGGGAGATTGGAAGTGAATCTCAGCTGAGAAGAAGCAAATCTTCTGTTGTTAGGAAGTCATACACCAGTGATGACGAGCTCGATGAAATAAACTATCCATTATCTTCCATATTGAATAGTGGCTCCTCCTCACCAGCATCATCAAAGCCCAACTGGAAGTGGAAAGACAGTCGTGATGAATCTGCCGTCAGATATGAACTCCTCAGGGATGTTTGGATGAACAGTGAATGA	3213	0.4255	MKGKNRRSGGVVHMEYLIHIQEIKPWPPSQSLRSLRSVLIQWENGDRSSGSTGVVSPSLGPNSAPGEAKLEFNESFRLPVTLSRDMSIRNSTAAVFQKNCLEFHLHETRRDKTTKGQLLGTAIIDLADCGVLRETLSIRTPLNCQRNYRNTDQPLLFIQIEPVEKSRPKSSLKDSLTKGNNGSESVSALMNGEYAEEAEITSFTDDDVSSHSSVAAVTTSSESSACMPPEHEENGPAQNSGSNDKEHEHPLTSETRVEKLNVMEQDAYERLERSSSYVSSMDVSSEVGSPVNGHTSITSTPNHRSATTPKQVASLNADSSSPTLEENSKSRSRISDDENLDQESCEKVANCRNMSTVVQRNNNESDFDIYSSNTTSLDSNYLVDTNPSFGLETKDKLSESCEEVDKSRVLEGGSDNYYSSIQDQHGNEMFHSDKQYHVEDESVAEGSKDQVLLSSNSYSFGGSDNGMKGNVLKNERLKNVRSVRSSADSVRNIGSLGNNHLIEVKENGVNGDAQNNGANIRSSDRKDAKVYPREARNAILDNKIEHLENKIKMLEGELREAAAIEAALYSVVAEHGSSMSKVHAPARRLSRLYLHACKENFQARRAGAAKSAVSGLVLVAKACGNDVPRLTFWLSNSIVLRTIISKTTKGMTPSNPSGSSTRRRNGEGNGKVTQPLLWRGFSPRKNENTAFEYGGIGSWDDPNMFTSALEKVEAWIFSRIVESIWWQSLTPHMQLADAKATCKDSAKNYKNMSSSCDQEQGNLSLGIWKNAFREACERLCPIRAGGHECGCLSVLPRLIMEQCVARLDVAMFNAILRESDDDIPTDPVSDPISDPKVLPIPPGQSSFGAGAQLKTAIGNWSRWLTDLFGMDDDDPLEDRDENDLDSNDGSQNTLKSFHLLNALSDLLMLPKDMLLNASIRKEVCPMFSASLIKKILDNFVPDEFCPDPIPTDVFEALDSQDDLEDENESINNFPCNAAPIAYSPPSSTTITSITGEIGSESQLRRSKSSVVRKSYTSDDELDEINYPLSSILNSGSSSPASSKPNWKWKDSRDESAVRYELLRDVWMNSE*	1071

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso19g0763	1070	MobiDBLite	consensus disorder prediction	1031	1053	-	-
	Gso19g0763	1070	PANTHER	EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN	2	1070	-	-
	Gso19g0763	1070	MobiDBLite	consensus disorder prediction	279	328	-	-
	Gso19g0763	1070	MobiDBLite	consensus disorder prediction	1031	1045	-	-
	Gso19g0763	1070	MobiDBLite	consensus disorder prediction	649	668	-	-
	Gso19g0763	1070	MobiDBLite	consensus disorder prediction	202	260	-	-
	Gso19g0763	1070	MobiDBLite	consensus disorder prediction	46	66	-	-
	Gso19g0763	1070	Pfam	N-terminal C2 in EEIG1 and EHBP1 proteins	15	129	IPR019448	-
	Gso19g0763	1070	Coils	Coil	537	564	-	-
	Gso19g0763	1070	MobiDBLite	consensus disorder prediction	509	528	-	-
	Gso19g0763	1070	PANTHER	NUCLEAR PORE COMPLEX PROTEIN NUP205	2	1070	IPR021827	GO:0005643
	Gso19g0763	1070	MobiDBLite	consensus disorder prediction	242	260	-	-
	Gso19g0763	1070	MobiDBLite	consensus disorder prediction	167	186	-	-
	Gso19g0763	1070	ProSiteProfiles	C2 NT-type domain profile.	4	164	IPR019448	-
	Gso19g0763	1070	MobiDBLite	consensus disorder prediction	205	227	-	-
	Gso19g0763	1070	MobiDBLite	consensus disorder prediction	279	342	-	-
	Gso19g0763	1070	MobiDBLite	consensus disorder prediction	649	675	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso19g0763	Gso-Chr19	31258576	31265352	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso19g0763	-		-	gmx:100783487	2017.66

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso19g0763	19	31258576	31265352	Gso16g0489	16	5760428	5767125	GST
	Gso19g0763	19	31258576	31265352	Gso19g0653	19	26951729	26959323	PCT
	Gso19g0653	19	26951729	26959323	Gso19g0763	19	31258576	31265352	PCT