Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g0653 ATGGTTCTAGGCATGAGAGGAAAGAACAGGAGAGGAGTCACAGTTCAAATTGATTTCCTCATTCACATTCAGGAGATTAAGCCTTGGCCTCCTTCACAATCTCTAAGATCCCTGCGATCTGTGTTGATAGAATGGAAGAATGGTGAATGTGCATCAGGTTCTACCAATCTTGTTGCCCCTTCACTTGGTTCAGTTATAGGTGAAGGGAGAATTGAATTTAATGAGTCATTTAGGCTTCATGTAACTTTGTTGAGGGACATGTCTGTGAGAGGTGGTGATGCCGATGTGTTCCAAAAGAATTGCTTGGAGTTCAACTTGTACGAGCCGCGGAGAGATAAGACTGTTAAGGGCCAGTTGCTGGCAACTGGCGTCGTAGATTTGGCAGAATATGGGGCACTTAAAGAGTCCTTGAGCACTAGTGTTCCTATGAACTGCAAGAGGAGCTACAGGAACACAGATCAGCCACTTTTGTTCATTAAAATTCGGCCCGTTGAAAGGAATCGCGCTAGTGCCTTGTTGAAGGATAGTAATGGTGGTGACTCAGTGTCAACACTCATGAATGAAGAATATGCTGAGGAAGCCGAGATTGCCTCTTTTACTGATGATGATGTCTCGTCACATTCATCTGTGGCAGCAGTTTCTACTTCAATTGAGTCCACTGGTTTTACCCAGCCAAAATTTGGAACGAACGAACCAATTAGCAACAACACTGGTGTGAATGCTAAGAAACATCCCTTGGCTTCAGAAAGAAGGCTTGAGAACATGAATATGGTGCAAGAAGATACACACAAGCTTGAGAGGAGTTCTTACGTGTCATCAACGGATGTATCTCCTGTTATCAGGAGTCTGGTAAATGGTCATGCTTCTAATTCTCCTAATCGCAATTCATTGTCAATCCAAAAGCTAGCTGCTTCACCTAGTGCCGATTCTTCATCACCATCTTCAGTTTGTGACAATTTAGACATAAATCCTAGGAGCATGACAAGAAGCAGTGGTCATGAAAGTTTGGGTCAGAGTTTTCATGAAAAGCTTGCTAATTACAGAAATATAGTTGCTGATGTCCAAAGAAACAGTAATGAAAGTACTTTTGGCATTTATTCAAAACATACATCATCTCAAGATAGAGGTCACTTCACTAGCAAAAATCCAGGCTATGAAAACTTTGATACTACTAAATGTGATGACAAATTAAATGGGAGATGTAAGGAAGCTGACAAATATTTTATGAAGGAGAGATCAAATTTGGATGGAAATGAAAGATCTAATTTGGATGGGCAAAACTACATAGAAGATGAACAATTGGTAGCACAAGAGGCCAGAGATCAAGCCTTATTGGGTAGCAATACACATTCTTATGGGGAGTCAAATACGAGTATGCAGGAAAATATTCTCAAAAGTGAAAGATTAAAGAACACGAAGTCGGTGAGGTTACCGGGAGACTCAGTTAGGAATGCTGAATTAAATGAAAATGGAATTCTTGGAGATGCACAAAACAGTTCAGGGAACAGAAGCAATGACAGAAGAGATTCTAAGATTCTTGCAAAGGAAATAAGAAGTGGTACTCTAGATGGAAAAATTGAGCATTTAGAAAAGAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCCGCTGCTATTGAGGCTGCTTTATATACAGTAGTTGCTGAGCATGGAAACTCCACAAGTAAAGTTCATGCCCCAGCTCGGCGCCTTTCCAGGCTCTATCTTCATGCTAGTAAAGAAAATCTTCAAGAAAGAAGGGCTGGGGCAGCTAAAAGTTCAGTTTCAGGATTAGTACTTGTTACAAAGGCATGTGGAAACGATGTCCCAAGGTTGACTTTTTGGTTGTCTAATACTATAGTGTTGAGAACAATTATAAGCCAAACAGTCAAAGTTCCACCAAATCCTGCTGGATCTGGTAGAAGAAAGAAAACTGAGGGAGAGGAGGGGTGTGGCAAGATAACAACCTCACTAAGGGTGAAGGGGTTATACCCCAGAAAAACTGAAAATACAGCTTTAGGATATGAAGGTTTTGGTAACTGGGATGATCCCCATATATTCATATTAGCACTCGAAAAGGTTGAAGCTTGGATCTTCTCTCGCATTATAGAATCCATCTGGTGGCAGACTCTGACTCCACATATGCAGCACACCATGGTGACCAACAAGGAAGTGATGTCTGCCACAAGAAAAGACTATAGAAGGACTTCAAGCTCATGTGATCAAAAGCAGGGTAACTTGTCTGTATATATTTGGAAGAATGCTTTTAGGGAAGCCTGTGAAAGGGTCTGTCCTATTCGAGCCCGAGGGCATGAGTGTGGCTGTCTGTCTATGCTTTCTAGATTGATAATGGAGCAGTGTGTGGCGAGGTTAGATGTGGCTATGTTCAATGCCATTCTTCGCGAATCTGCTGATGATATACCAACTGATCCTGTATCTGATGCTATTAGTGATCCCAACGTTCTCCCCATTCCACCTGGAAAATCAAGCTTCGGAGCTGGTGCACAGCTAAAAACTGTGATTGGGACCTGGTCTAGATGGTTGACTGATCTATTTGGCATGGATGATGTTGACTCAATTGAAGATAAAGCTGACCCTGATCACAATGAAGAGAGAGAAAATACATTCTTTAAGTCCTTCAGTATTCTCAATGCACTAAGTGACCTCTTGATGCTTCCTAAGGATATGCTGTTAAGTGCATCCATAAGGAATGAGGTGTGCCCAATGTTTAATGCAACACTTATCAAGAAGATTCTAGACAACTTTGTCCCGGATGAGCTTTGCCCTGATCCTGTTCCCTCTAATGTTTTTGAAGCTTTGAACTCAGAGAATGAAATGGAAGATGGAAAGGAGTATGTCAACAACTTTCCATGCATTGCAGCTCCCATTGCCTATTCACCACCACCAGCAACTTCCATTGCAAGCATTGTTGGGGAGATAGGAAGCAAATCTCAACTAAGAAGAAACAAATCTTCTGTTGTTAGGAAGTCACACACAAGTGATGATGAGCTCGATGAATTGAAGTCCCCATTGTCTTCAATATTCTTCAGTGTTTCCTCATCCCCAAAAGTTTTAACAAAATCCAGCTTGAAGTTCAAAGAAATTCGCAACCAATCTCCTGTCAGATATGAACTCCTTAGGGATGTATGGATGAAAAGCGATTAG 3165 0.4139 MVLGMRGKNRRGVTVQIDFLIHIQEIKPWPPSQSLRSLRSVLIEWKNGECASGSTNLVAPSLGSVIGEGRIEFNESFRLHVTLLRDMSVRGGDADVFQKNCLEFNLYEPRRDKTVKGQLLATGVVDLAEYGALKESLSTSVPMNCKRSYRNTDQPLLFIKIRPVERNRASALLKDSNGGDSVSTLMNEEYAEEAEIASFTDDDVSSHSSVAAVSTSIESTGFTQPKFGTNEPISNNTGVNAKKHPLASERRLENMNMVQEDTHKLERSSYVSSTDVSPVIRSLVNGHASNSPNRNSLSIQKLAASPSADSSSPSSVCDNLDINPRSMTRSSGHESLGQSFHEKLANYRNIVADVQRNSNESTFGIYSKHTSSQDRGHFTSKNPGYENFDTTKCDDKLNGRCKEADKYFMKERSNLDGNERSNLDGQNYIEDEQLVAQEARDQALLGSNTHSYGESNTSMQENILKSERLKNTKSVRLPGDSVRNAELNENGILGDAQNSSGNRSNDRRDSKILAKEIRSGTLDGKIEHLEKKIKMLEGELREAAAIEAALYTVVAEHGNSTSKVHAPARRLSRLYLHASKENLQERRAGAAKSSVSGLVLVTKACGNDVPRLTFWLSNTIVLRTIISQTVKVPPNPAGSGRRKKTEGEEGCGKITTSLRVKGLYPRKTENTALGYEGFGNWDDPHIFILALEKVEAWIFSRIIESIWWQTLTPHMQHTMVTNKEVMSATRKDYRRTSSSCDQKQGNLSVYIWKNAFREACERVCPIRARGHECGCLSMLSRLIMEQCVARLDVAMFNAILRESADDIPTDPVSDAISDPNVLPIPPGKSSFGAGAQLKTVIGTWSRWLTDLFGMDDVDSIEDKADPDHNEERENTFFKSFSILNALSDLLMLPKDMLLSASIRNEVCPMFNATLIKKILDNFVPDELCPDPVPSNVFEALNSENEMEDGKEYVNNFPCIAAPIAYSPPPATSIASIVGEIGSKSQLRRNKSSVVRKSHTSDDELDELKSPLSSIFFSVSSSPKVLTKSSLKFKEIRNQSPVRYELLRDVWMKSD* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g0653 1054 ProSiteProfiles C2 NT-type domain profile. 7 165 IPR019448 -
Gso19g0653 1054 MobiDBLite consensus disorder prediction 300 336 - -
Gso19g0653 1054 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 1054 - -
Gso19g0653 1054 Coils Coil 526 546 - -
Gso19g0653 1054 MobiDBLite consensus disorder prediction 223 245 - -
Gso19g0653 1054 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 1054 IPR021827 GO:0005643
Gso19g0653 1054 MobiDBLite consensus disorder prediction 466 512 - -
Gso19g0653 1054 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 16 140 IPR019448 -
Gso19g0653 1054 MobiDBLite consensus disorder prediction 223 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g0653 Gso-Chr19 26951729 26959323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g0653 - - gmx:100818584 2014.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0763 19 31258576 31265352 Gso19g0653 19 26951729 26959323 PCT
Gso16g0489 16 5760428 5767125 Gso19g0653 19 26951729 26959323 PCT
Gso19g0653 19 26951729 26959323 Gso19g0763 19 31258576 31265352 PCT
Gso19g0653 19 26951729 26959323 Gso16g0489 16 5760428 5767125 PCT