Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0489 ATGAAAGGAAAGAACAGGAGAAGTGGTGGTGCTATCCATATGGAGTACCTCATTCACATTCAGGAGATTAAGCCTTGGCCCCCATCACAGTCTCTCAGATCACTTCGTTCTGTGTTGATACAATGGGAGAATGGTGAACGCTCTTCGGGGTCTACCGGTGTAGTTTCACCTTCGCTTGGTCCTAATTCTGCTGCCGGTGAGGGAAAACTCGAGTTTAACGAGTCGTTTAGGCTTCCTGTAACTCTGTCAAGGGATATGTCTATTCGAAATAGTACTGCTGCTGTGTTCCAGAAGAATTGCTTGGAGTTTCACTTGCATGAAACTCGAAGAGATAAGACCACTAAAGGGCAGTTACTGGGGACTGCCATCATAGACTTGGCAGATTGTGGCGTGCTTAGAGAGACCTTGAGCATTCGTACGCCATTGAACTGCCAGAGGAACTACAGAAACACAGATCAGCCACTTTTGTTCATTCAAATTGAGCCTGTTGAAAAGAGCTGCCCTAAGTCCTCCTTGAAGGACAGCTTGTCAAAGGAGGTGACAAAGGGAAATAATGGCAGTGAATCTATATCAGAATTGATGAATGGAGAGTATGCTGAGGAAGCTGAGATTGCCTCATCTACTGATGATGATGTTTCATCTCATTCATCTGCGGCCGCAGTCACTACTTCCTCTGAGTCTAGCGCGTGTATGCCCCCCGAACATGAAGAGAATGCACCAAATGGACCAGCTCAAAACAGTGGTAGGAATGACAAGGAGCATGAGCATCCCTTGGCCTCAGAGACAAGAGTTGAGAAGTTGAATGAGATGGAACAAGATGCATATGAGAGACTGGAGAGGAGTTCATCCTATGTGTCCTCCAAAATTGGGAGTCCAGTAAATGGTCATACCTCTATTACAAGTACTCCAAATCATAGATCAGCAACAACCCCAAAGCAGGCTGCTTCTTTGAATGCTGATTCTTCGTCCCCAATCTTGGAGGAAAATTCTAAGAGCAGGTCCATAAGCAGTGATGATGAAAATTTGGATCAGGAGGGTTGTGAAAAAGTTTCCAATGGTAGAAATATGAGTACAGGTGTTCAAATAAACAATGACGAAAGTGATTTTGACATCTATTCTAGCAACACTACATCTCTAGACAGTAATTACCTCGTGGACAAGAATCCAAGCTTTGGTTTGGGAACCAAAGACAACTTAAGTGAAATGTTTCATTCTGATAAGCAATATCATGTAGAAGATGAATCGGTGGCACAAGGTGTGAAAGATCAAGTTAATTTGAGTAGCAATTCATATTCTTTAGGTGGGTTAGATAATGGTATGAAAGGCAATGTTCTGAAAAATGAAAGATTAAAGCATGTGAGGTCTGTAAGATCATCAGCCGACTCAGTTAGGTCTATTGGGTCACTTGGTAACAATCATCTCGCTGAGGTAAAGGAAAATGGTGTTAATGGAGATACCCAAAATAATGGAGGGAACATTAGAAGCAGTGACAGAAAAGATGCCAAGGTTTATCCAAGGGAAGCCAGAAATGCCATTTTAGATCGCAAGATTGAGCACTTGGAAAACAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCTGGTATTGAGGCTGCTTTATATTCAGTAGTTGCTGAGCATGGAAGCTCCACGAGTAAGGTTCATGCCCCAGCTCGACGCCTTTCGAGGCTGTACCTTCATGCTTGTAAAGAAAATCTTCAAGCAAGAAGGGCTGGGGCAGCTAAAAGTGCTGTTTCAGGATTAGCCCTTGTTGCAAAGGCATGTGGAAATGATGTCCCAAGGTTAACATTTTGGTTGTCTAATTCTATTGTGCTGAGAACAATTATAAGCAAAACTACCAAAGGCATGACACCATCTAATCCTTCTGGATCTAGTACAAGTAGGAGGAATGGAGAAGGGAATGACAAGGTAACACAACCATTACTATGGAGGGGGTTCTCTCATAGAAAAACTGAAAATACAGCTTTTGAATATGGAGGTATAGGTAACTGGGATGACCCAAATGTGTTCACATCAGCATTGGAAAAGGTTGAAGCTTGGATCTTCTCTCGCATTGTGGAATCTATTTGGTGGCAGTCTTTGACTCCACATATGCAGCTTGCTGATGCAAAGATCACTCATAAGGATTCAGCAAAAAACTATACAAATATGTCTAGTTCATGCGATCAAGAGTGGGGAAATTTATCACTAGATATTTGGAAGAATGCTTTTAGAGAAGCCTGTGAAAGGCTTTGCCCTATCCGAGCTGGAGGGCACGAGTGTGGCTGTTTGTCTGTGCTACCTAAATTGATAATGGAGCAGTGTGTGGCTAGATTAGATGTTGCTATGTTCAATGCCATTCTTCGGGAATCTGATGATGATATTCCTACTGATCCTGTATCTGATCCCATTAGTGATCCCAAGGTTCTCCCCATTCCACCTGGTCAATCAAGCTTTGGGGCTGGTGCACAGCTAAAAACTGCGATTGGTAACTGGTCTAGATGGCTGACTGGTCTATTTGGTATGGATGATGACGACCCACTTGAGGATATAGATGATAATGACCTTGATAGCAATGATGAAAGTCAAAATACCTTCAAGTCCTTCCATCTTCTTAATGCTTTAAGCGACCTCCTGATGCTTCCTAAGGATATGCTCTTAAATGCATCCATCAGGAAAGAGGTGTGTCCAATGTTTAGTGCATCGCTAATCAAGAAGATTCTAGACAATTTTGTCCCGGATGAGTTTTGCCCTGATCCAATTCCCACTGATGTTTTTGAAGCTCTGGACTCACAGGATGATCTTGAGGATGAAAATGAGTCTATCAGCAACTTCCCCTGCAATGCAGCTCCCACTGCATATTCCCCTCCACCAGCAGCTACCATTACAAACATTACTGGGGAGTTTGGAAGTGAATCTCAGCTAAGAAGAAGCAAATCTTCTGTTGTTAGGAAGTCATACACCAGTGATGATGAGCTCGATGAACTAAACTATCCATTATCTTCCATATTGAATATTGGCTCATCCTCATCAGCATCAACAAACTCCAACCGGAAGGGGAAAGACAGTCGCGATGAATCTGCCATCAGATATGAACTCCTCAGGGATGTTTGGATGAACAGTGAATGA 3132 0.4285 MKGKNRRSGGAIHMEYLIHIQEIKPWPPSQSLRSLRSVLIQWENGERSSGSTGVVSPSLGPNSAAGEGKLEFNESFRLPVTLSRDMSIRNSTAAVFQKNCLEFHLHETRRDKTTKGQLLGTAIIDLADCGVLRETLSIRTPLNCQRNYRNTDQPLLFIQIEPVEKSCPKSSLKDSLSKEVTKGNNGSESISELMNGEYAEEAEIASSTDDDVSSHSSAAAVTTSSESSACMPPEHEENAPNGPAQNSGRNDKEHEHPLASETRVEKLNEMEQDAYERLERSSSYVSSKIGSPVNGHTSITSTPNHRSATTPKQAASLNADSSSPILEENSKSRSISSDDENLDQEGCEKVSNGRNMSTGVQINNDESDFDIYSSNTTSLDSNYLVDKNPSFGLGTKDNLSEMFHSDKQYHVEDESVAQGVKDQVNLSSNSYSLGGLDNGMKGNVLKNERLKHVRSVRSSADSVRSIGSLGNNHLAEVKENGVNGDTQNNGGNIRSSDRKDAKVYPREARNAILDRKIEHLENKIKMLEGELREAAGIEAALYSVVAEHGSSTSKVHAPARRLSRLYLHACKENLQARRAGAAKSAVSGLALVAKACGNDVPRLTFWLSNSIVLRTIISKTTKGMTPSNPSGSSTSRRNGEGNDKVTQPLLWRGFSHRKTENTAFEYGGIGNWDDPNVFTSALEKVEAWIFSRIVESIWWQSLTPHMQLADAKITHKDSAKNYTNMSSSCDQEWGNLSLDIWKNAFREACERLCPIRAGGHECGCLSVLPKLIMEQCVARLDVAMFNAILRESDDDIPTDPVSDPISDPKVLPIPPGQSSFGAGAQLKTAIGNWSRWLTGLFGMDDDDPLEDIDDNDLDSNDESQNTFKSFHLLNALSDLLMLPKDMLLNASIRKEVCPMFSASLIKKILDNFVPDEFCPDPIPTDVFEALDSQDDLEDENESISNFPCNAAPTAYSPPPAATITNITGEFGSESQLRRSKSSVVRKSYTSDDELDELNYPLSSILNIGSSSSASTNSNRKGKDSRDESAIRYELLRDVWMNSE* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0489 1043 MobiDBLite consensus disorder prediction 177 191 - -
Gso16g0489 1043 MobiDBLite consensus disorder prediction 622 645 - -
Gso16g0489 1043 MobiDBLite consensus disorder prediction 622 642 - -
Gso16g0489 1043 MobiDBLite consensus disorder prediction 348 366 - -
Gso16g0489 1043 MobiDBLite consensus disorder prediction 248 278 - -
Gso16g0489 1043 MobiDBLite consensus disorder prediction 479 501 - -
Gso16g0489 1043 ProSiteProfiles C2 NT-type domain profile. 4 164 IPR019448 -
Gso16g0489 1043 MobiDBLite consensus disorder prediction 332 347 - -
Gso16g0489 1043 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 14 129 IPR019448 -
Gso16g0489 1043 MobiDBLite consensus disorder prediction 209 231 - -
Gso16g0489 1043 MobiDBLite consensus disorder prediction 47 66 - -
Gso16g0489 1043 Coils Coil 510 537 - -
Gso16g0489 1043 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 2 1043 IPR021827 GO:0005643
Gso16g0489 1043 MobiDBLite consensus disorder prediction 279 331 - -
Gso16g0489 1043 MobiDBLite consensus disorder prediction 1007 1027 - -
Gso16g0489 1043 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 2 1043 - -
Gso16g0489 1043 MobiDBLite consensus disorder prediction 203 366 - -
Gso16g0489 1043 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0489 Gso-Chr16 5760428 5767125 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0489 - - gmx:100775183 1987.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0763 19 31258576 31265352 Gso16g0489 16 5760428 5767125 GST
Gso16g0489 16 5760428 5767125 Gso19g0653 19 26951729 26959323 PCT
Gso19g0653 19 26951729 26959323 Gso16g0489 16 5760428 5767125 PCT