Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0063 ATGTCAACCTCTTCCATAAACGGGTGGTGCCTCTCTTCCATCTCCCCAGCCAAAACCTCTCTCAGGAAGGCCACATTACGCCCTTCCGTCTTCGCAACCCTTAACACTCCTTCTTCTCCTTCCTCTTCATCTTCCTTCCCCTCTCTCATTCAAGACAGGCCTGTTTTTGCTGCCCCTGCCCCCATCATCACCCCAACTGTGAGAGAGGATATGGCAAAGGAATACGAGAAAGCTATTGAAGAACTTCAGAAATTGTTGAGGGAGAAGAGTGAACTCAAAGCGACAGCTGCTGAAAAAGTGGAGCAGATAACAGCTTCTCTAGGGACATCATCATCTGATGGCATCCCATCATCAGAAGCCTCAGACAGGATCAAAGCTGGTTTCATTCACTTCAAGAAGGAGAAATATGACAAGAATCCAGCTTTGTATGGTGAACTTGCCAAAGGCCAGAGCCCCAAGTTCATGGTGTTTGCTTGCTCAGACTCAAGGGTGTGCCCATCTCATGTGCTAGATTTCCAACCAGGAGAGGCCTTTGTGGTCAGAAATGTTGCCAACATTGTCCCACCATATGACCAGTCAAAATACGCTGGAACTGGGGCTGCAGTTGAGTATGCTGTTTTGCATCTTAAGGTGTCCGAGATTGTGGTCATTGGACACAGTGCTTGTGGTGGTATTAAGGGGCTTCTGTCTTTCCCATATGATGGAACCTACTCTACTGATTTTATTGAGGAGTGGGTCAAAATTGGCTTGCCTGCAAAGGCAAAGGTGAAGACACAGCATGGGGATGCCCCTTTTGCTGAGTTGTGCTCACACTGTGAGAAGGAATCTGTGAATGTTTCCCTTGGAAACCTGCTAACTTACCCATTTGTTAGAGATGGCTTGGTGAACAAAACATTGTCACTGAAAGGAGGATACTATGACTTTGTTAAAGGATCTTTTGAGCTCTGGGGCCTTCAGTTTGGCCTTGCATCCTCTTTCTCCGTTAAAGATGTGGCCACCATTCTCCATTGGAAGCTATAG 1020 0.4696 MSTSSINGWCLSSISPAKTSLRKATLRPSVFATLNTPSSPSSSSSFPSLIQDRPVFAAPAPIITPTVREDMAKEYEKAIEELQKLLREKSELKATAAEKVEQITASLGTSSSDGIPSSEASDRIKAGFIHFKKEKYDKNPALYGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQSKYAGTGAAVEYAVLHLKVSEIVVIGHSACGGIKGLLSFPYDGTYSTDFIEEWVKIGLPAKAKVKTQHGDAPFAELCSHCEKESVNVSLGNLLTYPFVRDGLVNKTLSLKGGYYDFVKGSFELWGLQFGLASSFSVKDVATILHWKL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0063 339 SMART Pro_CA_2 147 317 IPR001765 GO:0004089|GO:0008270
Gso5g0063 339 PANTHER BETA CARBONIC ANHYDRASE 2, CHLOROPLASTIC 1 328 - -
Gso5g0063 339 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 159 166 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gso5g0063 339 Gene3D Carbonic anhydrase 108 328 IPR036874 GO:0004089|GO:0008270
Gso5g0063 339 SUPERFAMILY beta-carbonic anhydrase, cab 121 322 IPR036874 GO:0004089|GO:0008270
Gso5g0063 339 PANTHER CARBONIC ANHYDRASE 1 328 IPR001765 GO:0004089|GO:0008270
Gso5g0063 339 Coils Coil 68 102 - -
Gso5g0063 339 CDD beta_CA_cladeB 127 316 IPR045066 GO:0004089|GO:0008270
Gso5g0063 339 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 203 223 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gso5g0063 339 Pfam Carbonic anhydrase 155 312 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0063 Gso-Chr5 667110 673376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0063 K01673 - gmx:100500448 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0063 5 667110 673376 Gso19g0069 19 794778 799522 GST