Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0367 ATGGCTCCATCTTCACTGTTTTCAAACATGCATCTCTTCTTCTTCTTTCTTCTTTCCTCCATACACCTCTCTCTACAACTCAACCACACCACCTCATTATTCTCACTCTCTTTCCCTCTCACACCACTCTCTCTCTCCACCAGCACCGCCTCCAAGATGATGCTACTCAACTCACGACCTAAATCACCACCTTATTCCTCTCCCTACAACTACAAGTTGTCTTTCAAATACTCCATGGCTTTAATCGTGGACCTTCCCATTGGGACCCCACCGCAAGTTCAGCCCATGGTTTTGGACACCGGAAGCCAGCTCTCGTGGATTCAGTGTCACAAAAAAGCTCCCGCTAAGCCTCCCCCAACGGCGTCGTTTGACCCTTCTCTCTCCTCCACCTTCTCTATCCTTCCGTGTACTCACCCTGTCTGCAAGCCGCGAATTCCCGATTTTACCCTCCCCACCTCCTGCGACCAGAACCGCCTCTGCCACTACTCCTACTTCTTCGCCGACGGCACCTACGCCGAGGGCAATCTCGTCAGAGAAAAATTCACCTTCTCCCGTTCCCTTTTTACCCCTCCTCTGATCCTCGGCTGCGCCACCGAGTCCACCGACCCCAGGGGCATTTTGGGAATGAACCGTGGACGCCTCTCTTTCGCTTCGCAGTCCAAAATTACTAAATTCTCATACTGTGTCCCCACCCGCGAGACCCGACCCGGTTACACTCCAACCGGGTCGTTCTACCTTGGCAACAACCCGAACTCTAACACATTTAAATACATCGCAATGTTGACTTTTGGTCAGAGTCAACGCATGCCGAATCTCGACCCTTTGGCCTACACTGTAGCCTTACAGGGGATAAGAATCGGAGGAAGAAAACTCAACATCTCGCCGGCGGTTTTTCGTGCTGATGCTGGCGGGTCGGGTCAAACTATGGTTGACTCCGGATCCGAGTTCACATACCTTGTTAACGAGGCTTATGATAAGGTGCGGGCTAAGGTGGTTAGGGCTGTGGGCCCCAGGATGAAGAAGGGTTACGTGTACGGTGGTGTTTCGGACATGTGTTTTGATGGGAATGCAGTTGAGATCGGACGATTGATAGGGGACATGGTGTTTGAGTTCGAGAATGGGGTGCAAATAGTGATTCCCAAGGAGAGGGTTCTGGCTACCGTGGAGGGTGGGGTCCACTGCGTAGGGATTGCGAACTCTGATAAATTGGGTGCGGCCAGTAACATTATTGGGAATTTTCATCAGCAGAATCTGTGGGTAGAGTTTGATCTGGTCAATCGCAGAGTGGGTTTCGGTACGGCTGATTGTAGCAGATTGTCTAACTAG 1326 0.5143 MAPSSLFSNMHLFFFFLLSSIHLSLQLNHTTSLFSLSFPLTPLSLSTSTASKMMLLNSRPKSPPYSSPYNYKLSFKYSMALIVDLPIGTPPQVQPMVLDTGSQLSWIQCHKKAPAKPPPTASFDPSLSSTFSILPCTHPVCKPRIPDFTLPTSCDQNRLCHYSYFFADGTYAEGNLVREKFTFSRSLFTPPLILGCATESTDPRGILGMNRGRLSFASQSKITKFSYCVPTRETRPGYTPTGSFYLGNNPNSNTFKYIAMLTFGQSQRMPNLDPLAYTVALQGIRIGGRKLNISPAVFRADAGGSGQTMVDSGSEFTYLVNEAYDKVRAKVVRAVGPRMKKGYVYGGVSDMCFDGNAVEIGRLIGDMVFEFENGVQIVIPKERVLATVEGGVHCVGIANSDKLGAASNIIGNFHQQNLWVEFDLVNRRVGFGTADCSRLSN* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0367 441 Gene3D Acid Proteases 245 441 IPR021109 -
Gso18g0367 441 Pfam Xylanase inhibitor C-terminal 276 432 IPR032799 -
Gso18g0367 441 SUPERFAMILY Acid proteases 82 439 IPR021109 -
Gso18g0367 441 PANTHER ASPARTYL PROTEASE-RELATED 10 441 IPR001461 GO:0004190|GO:0006508
Gso18g0367 441 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 10 441 - -
Gso18g0367 441 Pfam Xylanase inhibitor N-terminal 83 237 IPR032861 -
Gso18g0367 441 ProSiteProfiles Peptidase family A1 domain profile. 81 432 IPR033121 -
Gso18g0367 441 Gene3D Acid Proteases 73 243 IPR021109 -
Gso18g0367 441 CDD pepsin_A_like_plant 82 436 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0367 Gso-Chr18 3575616 3577390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0367 83 439 Miscellaneous Gene Families AT1G44130 23.325 1.27e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0367 - - gmx:100806624 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0367 18 3575616 3577390 Gso13g1248 13 27623075 27625035 GST
Gso18g0367 18 3575616 3577390 Gso2g2074 2 45340525 45342380 PCT
Gso2g2074 2 45340525 45342380 Gso18g0367 18 3575616 3577390 PCT