Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0330 ATGGTGTTGAAGAAGAGGGTAGATTATGGATTTAATGGCTTTCGAGTTCCTGTTATACCTAAAGCTCCTAGATCTGCCAGAAGGAGGGTTGCTTTCAACAAAGCAGTTGAGGATGGTCAAGTTTGCGCTATTGAACTACTGGCATCTTTAGCTGGCCAATTGTTGCAGGAGAGTGAAAGTTCTGCTTCCAGCAATGCGTCTGAAGGAAATCATCAGCCTGCCTTCAGCCAAGGTGTAATTGAGCAAGATATACAAGATGAAGTTAAACCATTAAAAATGGAGGAAATTCATCAGGGAAATTGTGCAGAGAGTACTTTTAAGACTGAGGTAGCCTCACAAAAAAGTAGTCAGAAACCTCTTTCACATACCAAGACTGGACATGTTTCAGTTAATAATAGTTCTGACTGTTGTGAGAAAGCTGAAGCTGATGTGAAGTCTGAAATTTTCGAATGGGATAATAAATTTGGGAATTATTCTAATAGATTAGTAGAAACACGTGAAAAATTTAGGGTGTCCACTCATGGTAACATAAAGAATGGATTTAAATGGGAACAGGAGGCTGGAAGTTCATGCATTCGGGGATCAAATTTAGCTGATAAGTGTAGTTTGGAGGATCACTTAGAATTTGCTTCCTTTTCCAGGTATGGGAATGGCATTAAGTTAGGTTTTAGAGATGATGACGAAAAATTTTTAAGGTGCAAAAGGGTTTGCACTAAACCAAAGGCTTTTAGGTCTCCACGACGCATTGCACACCGAAGAATCAGGAATTTGATGTCTTCCAAATACTGGAAGACAGCTCCAAAGTTGAAGGACTGTGAACTTTCTGATCTAGGAGTACCTCGTTATCATAAGAGGAAAACTTGTTACGGTTTTGAAAGATCTCAGCACAATGCCATTGTTAAAAAGAGGAAATTCGTTGACCGGGTTTCAGGGGTAACTTCTGATGGAGGATTCAGTAGTGAGAGTGTGTCCAATTCACCTCAGAAAGGGATGGATGCAGACAAGCCTAGCTCATCTGCAAAATTGCATGTACTTAAGGCTAAGGATTCTCATGTAAAGTTTAGCATAAAGTCTATAAGGATACCAGAGCTTTATATTGAGGTTCCTGAAACTTCAACTGTTGGTTCACTAAAGAGGACAATCATGGAGGCAGTGATGGCTATACTTGGAGGTGGTGCACATGTTGGTGTTCTTCTTCAGGGGAAAAAAGTTAGAGATGACAATAGAACACTTGTGCAGACTGGTATATCTTGCAATGAAAATTTGGATACCCTGAGTTTCATGTTGGAGCCCACTTCACTACGAGCTTCTCCAACTATTTGTGTTGGTGATCCTTCTTCTCAATGTGAAACATCCCAGCCTACATGGCCCACAGAAACTCCTGTCTTAGATTCAGGAGTTACTGATACCTTGCATGACTCACCCTTGCTGACATATCCGGGCAACCTAATTGAAAGTAACCATGAGCCCACTTCTTCACTCGCCGACACTACAGTTAACAAAATAACACCTGATTCCAGAGCAATAGTTGCTGTTCCAGCTACCACAGAAACATTAGCTGTGGTTCCTGTGAGTCAGAAAACCAAGCGCTCTGAGTTTGTACAGCGTCGAACCAGGAGACCATTCTCTGTGACTGAGGTAGAAGCACTTGTTCACGCAGTTGAGGAACTTGGAACTGGGAGGTGGCGTGATGTTAAGTTGCGAGCTTTTGAGAATGCAGACCATAGGACTTATGTAGACTTAAAGGATAAATGGAAAACATTAGTGCACACTGCAACAATCTCCCCCCAACAGAGGAGGGGAGAACCAGTACCTCAGGAGCTCTTGGACAGAGTTTTGGCTGCTCATGCCTTCTGGTCTCAGCACCAAGCCAAGCAACATGGCAAGCATCAAGCTGGACCAGGAACCTTGAAGATTACAGAAGCCTCAGCTGAAAGACCTTGTGTGTGTTGA 1953 0.425 MVLKKRVDYGFNGFRVPVIPKAPRSARRRVAFNKAVEDGQVCAIELLASLAGQLLQESESSASSNASEGNHQPAFSQGVIEQDIQDEVKPLKMEEIHQGNCAESTFKTEVASQKSSQKPLSHTKTGHVSVNNSSDCCEKAEADVKSEIFEWDNKFGNYSNRLVETREKFRVSTHGNIKNGFKWEQEAGSSCIRGSNLADKCSLEDHLEFASFSRYGNGIKLGFRDDDEKFLRCKRVCTKPKAFRSPRRIAHRRIRNLMSSKYWKTAPKLKDCELSDLGVPRYHKRKTCYGFERSQHNAIVKKRKFVDRVSGVTSDGGFSSESVSNSPQKGMDADKPSSSAKLHVLKAKDSHVKFSIKSIRIPELYIEVPETSTVGSLKRTIMEAVMAILGGGAHVGVLLQGKKVRDDNRTLVQTGISCNENLDTLSFMLEPTSLRASPTICVGDPSSQCETSQPTWPTETPVLDSGVTDTLHDSPLLTYPGNLIESNHEPTSSLADTTVNKITPDSRAIVAVPATTETLAVVPVSQKTKRSEFVQRRTRRPFSVTEVEALVHAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTATISPQQRRGEPVPQELLDRVLAAHAFWSQHQAKQHGKHQAGPGTLKITEASAERPCVC* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0330 650 SUPERFAMILY Homeodomain-like 540 621 IPR009057 -
Gso18g0330 650 MobiDBLite consensus disorder prediction 314 333 - -
Gso18g0330 650 ProSiteProfiles Myb-like domain profile. 534 589 IPR001005 -
Gso18g0330 650 MobiDBLite consensus disorder prediction 107 127 - -
Gso18g0330 650 CDD SANT_TRF 540 590 - -
Gso18g0330 650 MobiDBLite consensus disorder prediction 314 336 - -
Gso18g0330 650 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 535 593 IPR017930 -
Gso18g0330 650 SMART sant 538 591 IPR001005 -
Gso18g0330 650 SUPERFAMILY Ubiquitin-like 348 425 IPR029071 -
Gso18g0330 650 Gene3D - 527 631 - -
Gso18g0330 650 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 209 - -
Gso18g0330 650 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 210 642 - -
Gso18g0330 650 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 209 IPR031105 -
Gso18g0330 650 PANTHER TELOMERIC REPEAT BINDING PROTEIN 210 642 IPR031105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0330 Gso-Chr18 3103325 3108604 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0330 - - gmx:100795471 1250.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0330 18 3103325 3108604 Gso18g0330 18 3103325 3108604 ECH
Gso11g1176 11 10563573 10568862 Gso18g0330 18 3103325 3108604 ECH
Gso18g0330 18 3103325 3108604 Gso13g1285 13 28200577 28205883 GST