Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1285 ATGGTGTTGAAGAAGAGAGTAGATCATGGATTTGATGGCTTACGAGTTCCTGTTATACCTAAAGCTCCTAGATCTGCAAGAAGGAGGATTGCTTTCAAAAAAGCAGTTGAAGATGGTCAAGTTTGTGCTATTGAACTACTGGCATCTTTAGCTGGTCAGTTGTTGCAGGAGAGTGAAGGTTCTGCTTCCAGCAATGCATCTGAAGGAAATCATCATCCCCCCTTTAGCCAAGGTGTCATTGAGCAAGATATACAAGATGGAGTTAAACCATTAAAGAAGGAGGAAATTCATCAGGGAAGTTGTGTAGAGAGTACTTTTAAGACCGAGGTAGCCTCACAAAACAGTAGTCAGAAACCTCTTTCACATACTAAGACGGGACATGTTTCAGTTAATAATAGTTCTGACTGTTGTGAGAAAGTTGAAGCTGATGTGAAGTCTGAAATTTTCGAATGGGATAATAAATTTGGGAATTATTCTAATAGATTAGTAGAAACACGTGAAAATTTTAGGAAGTCTAGTGATGGTAAAATAAAGAATGGGTTTAAACGGGAACAGGAGGCTGGAAGTTCATGCATTCGAGGATCAAATTTAGCTGATAAGTGTAGTTTGGAGGGCCACTTAGAATTGTATGTATCTCCTGCACTAATTGACTCAAAAAGTAATAAGAAATCTCCATTTCATAGGAAATCTTTTCCCAGTGCTTCCTTTTCCAGGAATGGGAATGGTATTAAGTTAGGTTTTAGAGATGATGACGAAAACTTTTTAAGGTGCAAAAAGTTTTGCACGAAGCCAAAGGCTTTTAGGTCTCCACGACGCATTGCACACCGAAGAATCAGGAATTTGATGTCTTTCAAATACTGGAAGACAGCTCCAAAGTTGAAGGACTCTGAACTTTCTAGATCTGAATTTGCAGATCTAGGAGTACCTCGTTATCATAAGAGGAAGACTTGTTACGGTTTTGAAAGATCTCAGCACAATGCCATTGTTAAAAAGAGGAAATTCGTTGACCGGGTTTCAGGAGTAACTTCTGATGGAGGATTCAGTAGTGAGAGTGTGTCCAATTCACCACAGAAAGGGATGGATGGAGACAAGCCTAGCTCATCTGCAAAATTGCATGTACCTAAGGCTAAGGATTCTCATGTAAAGTTTAGCATAAAGTCAATAAGGATTCCAGAGCTTTATATTGAGGTTCCTGAAACTTCAACTGTTGGTTCACTAAAGAGGACTATCGTGGAGGCAGTGATGGCTATACTTGGAGGTGGTGCACATGTTGGTGTTCTTCTTCAGGGGAAAAAAGTTAGAGATGACAATAGAACACTTGTGCAGACTGGTATATCTTGCAATGAAAATTTGGATACCCTGAGTTTCATGTTGGAGCCCACTTCACTACAAGCTTCTCCAACTGTTTGTGTTGGTGATCCTTCTTCTCAATGTGAAACATCCCAGCCTACCAGGTCCACAGAAATTCCTGTCTTAGATTCAGGAATTACTGATACCTTGCATGACTCACCCTTGCTGACATATCCGGGCAACCTAATTGAAAGTAACCATGAGTCTACTTCTTCACTTGCGGACACTACACTTGACAAACTAACACCTGATTCCAGAGCGATAGTTGTTGTTCCAGCTACCACAGAAACATTAGCTGTGGTTCCTGTGAGTCAGAAAACCAAGCGCTCTGAGTTTGTACAGCGTCGAACCAGGAGACCATTCTCTGTGACTGAGGTAGAAGCACTTGTTCATGCAGTTGAGGAACTCGGAACTGGGAGGTGGCGTGATGTTAAGTTGCGAGCTTTTGAGAATGCAGACCATAGGACTTATGTAGACTTAAAGGATAAATGGAAAACATTAGTGCACACCGCAACAATCTCCCCTCAACAAAGGAGGGGAGAGCCAGTACCTCAGGAGCTCTTGGACAGGGTTTTGGCTGCTCATGCTTTCTGGTCTCAGCACCAAGCCAAGCAACATGGCAAGCATCAAGCTGGACCAGGAACCTTGAAGATTACAGAAGCCTCAGCTGAAAGACCTTGTGTGTGTTGA 2040 0.4196 MVLKKRVDHGFDGLRVPVIPKAPRSARRRIAFKKAVEDGQVCAIELLASLAGQLLQESEGSASSNASEGNHHPPFSQGVIEQDIQDGVKPLKKEEIHQGSCVESTFKTEVASQNSSQKPLSHTKTGHVSVNNSSDCCEKVEADVKSEIFEWDNKFGNYSNRLVETRENFRKSSDGKIKNGFKREQEAGSSCIRGSNLADKCSLEGHLELYVSPALIDSKSNKKSPFHRKSFPSASFSRNGNGIKLGFRDDDENFLRCKKFCTKPKAFRSPRRIAHRRIRNLMSFKYWKTAPKLKDSELSRSEFADLGVPRYHKRKTCYGFERSQHNAIVKKRKFVDRVSGVTSDGGFSSESVSNSPQKGMDGDKPSSSAKLHVPKAKDSHVKFSIKSIRIPELYIEVPETSTVGSLKRTIVEAVMAILGGGAHVGVLLQGKKVRDDNRTLVQTGISCNENLDTLSFMLEPTSLQASPTVCVGDPSSQCETSQPTRSTEIPVLDSGITDTLHDSPLLTYPGNLIESNHESTSSLADTTLDKLTPDSRAIVVVPATTETLAVVPVSQKTKRSEFVQRRTRRPFSVTEVEALVHAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTATISPQQRRGEPVPQELLDRVLAAHAFWSQHQAKQHGKHQAGPGTLKITEASAERPCVC* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1285 679 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 564 622 IPR017930 -
Gso13g1285 679 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 671 - -
Gso13g1285 679 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 671 IPR031105 -
Gso13g1285 679 MobiDBLite consensus disorder prediction 343 373 - -
Gso13g1285 679 MobiDBLite consensus disorder prediction 343 362 - -
Gso13g1285 679 Gene3D - 556 660 - -
Gso13g1285 679 SUPERFAMILY Homeodomain-like 569 650 IPR009057 -
Gso13g1285 679 ProSiteProfiles Myb-like domain profile. 563 618 IPR001005 -
Gso13g1285 679 SMART sant 567 620 IPR001005 -
Gso13g1285 679 MobiDBLite consensus disorder prediction 58 77 - -
Gso13g1285 679 CDD SANT_TRF 569 619 - -
Gso13g1285 679 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1285 Gso-Chr13 28200577 28205883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1285 - - gmx:100814318 1321.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0330 18 3103325 3108604 Gso13g1285 13 28200577 28205883 GST