Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0319 ATGGCTGCCTCCGTCTCCACTGTCGGAGCTGTCAACAGAGCTCTTTTGAACCTGAATGGTTCTGGAGCTGGAGCTTCAGCTCCCAGTTCAGCCTTCTTTGGGACCAGCTTGAAGAAGGTTATTGCCTCAAGGGTCCCCAACAGCAAGGTTTCCGGTGGAAGCTTCAAGATTGTTGCTGTAGAAGAGAAGAAAGAGATTGAAGAGACCCAGCAGACCGACAAGGACAGATGGAAGGGTCTTGCCTATGATATCTCAGACGACCAACAAGACATCACAAGAGGAAAGGGTTTGGTTGACTCCCTTTTCCAAGCTCCACAGGATGCTGGAACTCACTATGCAGTCATGAGCTCCTACGAGTACCTCAGCACTGGACTTCGCCAGTACTTGGACAACAAAATGGATGGATTCTACATTGCTCCAGCTTTTATGGACAAGCTTGTTGTTCACATCTCCAAGAACTTCATGACCCTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATCTGGGGAGGCAAGGGACAAGGAAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCAGGAGAGCCAGCAAAACTGATCAGGCAGAGATACCGTGAAGCTGCAGACATGATCAAGAAGGGAAAGATGTGCGCTCTCTTCATCAACGATCTTGATGCAGGAGCTGGTCGTCTTGGTGGAACCACACAATACACTGTGAACAACCAGATGGTGAATGCCACTCTCATGAACATTGCTGATAACCCCACCAATGTGCAGCTTCCAGGTATGTACAACAAGGAAGAGAACCCCCGTGTTCCCATCATTGTCACCGGTAACGATTTCTCAACACTCTATGCACCTCTCATCCGTGATGGGCGTATGGAGAAGTTCTACTGGGCACCAACAAGGGAAGACCGCATTGGTGTTTGCACCGGAATTTTCCGCACTGATGGTATTCCTGAACAGGACATTGTCAAGCTTGTTGACACCTTCCCTGGCCAATCCATTGATTTCTTTGGTGCACTGAGGGCCAGAGTATATGATGATGAAGTGAGGAAGTGGATTTCTGGTGTTGGTGTTGACAGTGTTGGGAAGAAGCTTGTGAACTCAAAAGATGGACCTCCAACCTTTGAGCAGCCCAAGATGACTCTGGAGAAGCTCTTGCTGTATGGTAACATGCTTGTCCAAGAACAAGAGAATGTCAAGAGAGTCCAATTGGCTGACAAGTACTTGAACGAGGCTGCTCTTGGAAATGCTAACGAGGATGCTATTCAGAGGGGAACTTTCTTCCAGTCTTGA 1332 0.4812 MAASVSTVGAVNRALLNLNGSGAGASAPSSAFFGTSLKKVIASRVPNSKVSGGSFKIVAVEEKKEIEETQQTDKDRWKGLAYDISDDQQDITRGKGLVDSLFQAPQDAGTHYAVMSSYEYLSTGLRQYLDNKMDGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDGIPEQDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKDGPPTFEQPKMTLEKLLLYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIQRGTFFQS* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0319 443 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 441 - -
Gso18g0319 443 Pfam ATPase family associated with various cellular activities (AAA) 168 309 IPR003959 GO:0005524|GO:0016887
Gso18g0319 443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 337 IPR027417 -
Gso18g0319 443 Gene3D - 313 425 - -
Gso18g0319 443 PANTHER - 1 441 IPR044960 -
Gso18g0319 443 Gene3D - 128 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0319 Gso-Chr18 2937233 2941175 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0319 - - gmx:100797222 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0319 18 2937233 2941175 Gso18g0319 18 2937233 2941175 ECH
Gso3g0568 3 14748176 14751554 Gso18g0319 18 2937233 2941175 ECH
Gso18g0319 18 2937233 2941175 Gso13g1299 13 28393567 28397159 GST