Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0568 ATGGCCGCCTCAGTACCAACCGTTGGAGCCGTTAACATTGCACAGTTGAAACTGAATGGCTCTAGCAGTAGGGTGACAAGCTCACCATTCTTTGGAACAAGTTTGAAGAAAGTCAATTCTGAGAGTTCAAGCCAGAGGGGTGTGTGTCGGAATTTCAAGGTTTCTGCACAGATTGAATATGATGAGGAGAAGCAAACTTCAAAGGATAGATGGGGTGGACTTGCCTATGACACTTCAGATGACCAGCAAGATATCACTAGAGGGAAGGGAATGGTGGACACTCTCTTCCAAGCTCCCATGGAAAGTGGCACTCACTATGCTGTCATGAGTTCCTATGATTATATCAGTGCCGGACTTCGCCAGTACAATTTAGACAACACCATGGATGGCTTCTATATTGCTCCTGCATTTATGGACAAGATTGTTGTTCACATCACCAAGAACTTTTTGAACTTGCCAAATATTAAGGTCCCTCTTATTTTGGGTATTTGGGGAGGCAAAGGTCAGGGGAAATCATTTCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATAGTGATGAGTGCTGGAGAATTGGAAAGCGGAAATGCTGGAGAACCTGCAAAGTTGATTAGGCAAAGGTATCGCGAGGCAGCAGACATTATCAGAAAAGGAAAGATGTGCTGTCTCTTCATCAATGATCTTGATGCAGGAGCTGGTAGGCTTGGTGGAACCACTCAATACACAGTCAACAACCAGATGGTGAATGCAACCCTTATGAACATTGCTGACAACCCAACCAATGTCCAACTTCCTGGCATGTACAACAAGGAGGAGAATCCCCGTGTTCCCATCATAGTCACTGGCAATGACTTCTCAACATTGTATGCTCCTCTCATTCGTGATGGACGTATGGAGAAGTTCTATTGGGCACCTACTCGGGATGACAGGATTGGTGTCTGCCAAGGCATTTTCAGAACAGATGGTGTTCTAAAGGAGGATATTATCAAGCTTGTTGACACCTTCCTTGGGCAATCTATTGACTTCTTTGGTGCCTTGAGGGCCAGAGTCTATGATGATGAAGTAAGGAAGTGGATTTCTGGTGTTGGGGTGGAGAATATTGGGAAAAAGCTGGTGAACTCAAAGGAGGGACCTCCAACATTTGAGCAACCAAAGATGACTCTTAGCAAGCTCCTTGAGTATGGAAACATGCTTGTCCAAGAGCAAGAGAATGTGAAGAGGGTTCAATTGGCTGACAAATATCTCAATGAGGCTGCACTTGGAGATGCAAATGATGATGCCATCAAGACTGGAAACTTCTATGGACAAGGAGCTCAGCAAGTTCATGTTCCTGTCCCTGAAGGTTGCACTGACCCTACTGCTGAAAACTATGATCCAACAGCCAGAAGTGATGATGGAAGCTGCACATACAAATTTTAG 1425 0.4498 MAASVPTVGAVNIAQLKLNGSSSRVTSSPFFGTSLKKVNSESSSQRGVCRNFKVSAQIEYDEEKQTSKDRWGGLAYDTSDDQQDITRGKGMVDTLFQAPMESGTHYAVMSSYDYISAGLRQYNLDNTMDGFYIAPAFMDKIVVHITKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIVMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCQGIFRTDGVLKEDIIKLVDTFLGQSIDFFGALRARVYDDEVRKWISGVGVENIGKKLVNSKEGPPTFEQPKMTLSKLLEYGNMLVQEQENVKRVQLADKYLNEAALGDANDDAIKTGNFYGQGAQQVHVPVPEGCTDPTAENYDPTARSDDGSCTYKF* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0568 474 Gene3D - 308 420 - -
Gso3g0568 474 Gene3D - 123 307 IPR027417 -
Gso3g0568 474 Pfam ATPase family associated with various cellular activities (AAA) 163 304 IPR003959 GO:0005524|GO:0016887
Gso3g0568 474 MobiDBLite consensus disorder prediction 455 474 - -
Gso3g0568 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 332 IPR027417 -
Gso3g0568 474 PANTHER - 1 473 IPR044960 -
Gso3g0568 474 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC-LIKE ISOFORM X1 1 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0568 Gso-Chr3 14748176 14751554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0568 - - gmx:100795298 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0568 3 14748176 14751554 Gso18g0319 18 2937233 2941175 ECH
Gso3g0568 3 14748176 14751554 Gso3g0568 3 14748176 14751554 ECH