Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1299 ATGGCTGCCTCCGTCTCCACTGTCGGAGCTGTCAACAGAGCTCTTTTGAACCTGAATGGGTCTGGAGCTGGGGTTTCAGCTCCCAGTTCATCCTTCTTTGGGAGCAGCTTGAAGAAGGTTATTGGCTCAAGGGTCCCCAACACAAAGATTTCCTCTGGAAGCTTCAAGATTGTTGCTGTAGAAGAGAAGAAAGAGATTGAAGAGACCCAGCAGACCGACAAGGACAGATGGAAGGGTCTTGCCTATGATATCTCAGACGACCAACAGGACATCACAAGAGGAAAGGGTTTGGTTGACTCCCTTTTCCAAGCTCCACAGGATGCTGGAACTCACTATGCTGTCATGAGCTCCTACGAGTACCTTAGCACTGGACTTCGCCAGTACTTGGACAACAACATGGATGGATTTTACATTGCTCCAGCTTTTATGGACAAACTTGTTGTTCACATTACCAAGAACTTCATGACCCTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATCTGGGGAGGCAAGGGACAAGGAAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCAGGAGAGCCTGCAAAACTGATCAGGCAGAGATACCGTGAAGCCGCAGACTTGATCAAGAAGGGAAAGATGTGTGCTCTCTTCATCAACGATCTTGATGCAGGAGCTGGTCGTCTTGGTGGAACCACCCAATACACTGTCAACAACCAGATGGTGAATGCCACCCTCATGAACATTGCTGATAACCCCACCAATGTGCAGCTTCCTGGTATGTATAACAAGGAAGAGAATCCCCGTGTGCCCATCATCGTCACCGGTAACGATTTCTCCACACTCTATGCGCCTCTCATCCGTGATGGGCGTATGGAGAAGTTCTACTGGGCACCAACAAGGGATGACCGCATTGGTGTCTGCACTGGAATTTTTCGCACCGATTCAATTCCTGAACAGGACGTTGTCAAGATTGTTGACACCTTCCCTGGCCAATCCATTGATTTCTTTGGTGCACTGAGGGCCAGAGTATATGATGATGAAGTGAGGAAGTGGATTTCTGGTGTTGGTGTTGACGGCATTGGGAAGAAGCTTGTGAACTCAAAAGATGGACCTCCAACCTTTGAGCAGCCCAAGATGACTCTGGAGAAGCTCTTGACGTATGGTAACATGCTTGTCCAAGAACAAGAGAATGTCAAGAGAGTCCAATTGGCTGACAAGTACTTGAACGAGGCTGCACTTGGAAATGCTAACGAGGATGCTATTAACAGGGGAACTTTCTTCCAATCTTGA 1332 0.479 MAASVSTVGAVNRALLNLNGSGAGVSAPSSSFFGSSLKKVIGSRVPNTKISSGSFKIVAVEEKKEIEETQQTDKDRWKGLAYDISDDQQDITRGKGLVDSLFQAPQDAGTHYAVMSSYEYLSTGLRQYLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCTGIFRTDSIPEQDVVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDGIGKKLVNSKDGPPTFEQPKMTLEKLLTYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAINRGTFFQS* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1299 443 Gene3D - 128 312 IPR027417 -
Gso13g1299 443 Pfam ATPase family associated with various cellular activities (AAA) 168 309 IPR003959 GO:0005524|GO:0016887
Gso13g1299 443 PANTHER - 1 441 IPR044960 -
Gso13g1299 443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 334 IPR027417 -
Gso13g1299 443 Gene3D - 313 425 - -
Gso13g1299 443 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1299 Gso-Chr13 28393567 28397159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1299 - - gmx:100818034 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0319 18 2937233 2941175 Gso13g1299 13 28393567 28397159 GST