Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0278 ATGAAGGGTTCGAACAACCGGTTCTTCACGGTGGCGCTGGTGGCGGCGTGGTACTCCTCAAACATTGGGGTGCTTCTCCTGAACAAGTACTTGCTCAGCAACTACGGCTTCAAGTACCCAATCTTCCTCACCATGTGCCACATGACGGCGTGCTCCTTGCTCAGTTACGTCGCCATAGCGTGGATGAAGGTCGTGCCTTTGCAGAGCATTCGATCCAGGGTGCAATTCTTCAAGATCTCTGCTCTCAGCCTCGTTTTCTGCGTCTCCGTCGTGTTCGGGAACATTTCCTTGCGCTACCTCCCCGTGTCGTTTAACCAGGCTATTGGCGCCACCACGCCCTTCTTCACCGCCGTTTTCGCTTACCTTATGACCTTCAAGAGGGAGGCTTGGCTCACTTACCTCACCCTTGTTCCTGTTGTTACTGGAGTCATCATTGCCAGTGGGGGGGAACCGAGTTTCCATCTGTTTGGATTTATTATATGTGTTGCGGCTACAGCTGCAAGGGCTCTGAAATCAGTGCTACAAGGGATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTCTCCTTTACATGTCTCCAATGGCTGTGGTTTTCCTTCTTCCTGCAACACTTATAATGGAAGAGAATGTGGTTGGCATCACGTTGGCTCTTGCCAGAGATGATTCCAAGATCATTTGGTATCTGCTGTTTAATTCAGCACTTGCATATTTTGTCAACCTGACCAACTTTTTGGTCACGAAACATACCAGTGCTCTAACCCTTCAGGTACTAGGAAATGCTAAAGGGGCGGTAGCAGTAGTAGTTTCTATTCTAATATTCAGAAACCCAGTGTCAGTCACTGGAATGATGGGTTACTCACTCACAGTCTTTGGAGTTATACTCTACAGTGAAGCCAAAAAGAGAAGCAAGTGA 924 0.4805 MKGSNNRFFTVALVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKVVPLQSIRSRVQFFKISALSLVFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFIICVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMSPMAVVFLLPATLIMEENVVGITLALARDDSKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYSLTVFGVILYSEAKKRSK* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0278 307 SUPERFAMILY Multidrug resistance efflux transporter EmrE 198 301 - -
Gso18g0278 307 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 149 - -
Gso18g0278 307 PANTHER - 1 306 - -
Gso18g0278 307 PANTHER SOLUTE CARRIER FAMILY 35 1 306 - -
Gso18g0278 307 Pfam Triose-phosphate Transporter family 12 300 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0278 Gso-Chr18 2446516 2449925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0278 3 307 Organic Solute Cotransporters AT3G11320 91.148 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0278 - - gmx:100819087 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0278 18 2446516 2449925 Gso18g0278 18 2446516 2449925 ECH
Gso3g0665 3 20237488 20241290 Gso18g0278 18 2446516 2449925 ECH
Gso18g0278 18 2446516 2449925 Gso13g1340 13 28897710 28904412 GST
Gso18g0278 18 2446516 2449925 Gso14g0535 14 5108835 5112351 PCT
Gso18g0278 18 2446516 2449925 Gso2g2158 2 46246119 46249510 PCT
Gso14g0535 14 5108835 5112351 Gso18g0278 18 2446516 2449925 PCT
Gso2g2158 2 46246119 46249510 Gso18g0278 18 2446516 2449925 PCT