Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0665 ATGATGATGATGAACAATACTATTATTCCATGGTCAACCATTGGCGTTGTGATTGCATGGTACACTTCCAACATAGGGGTTCTTCTTCTGAACAAGTACTTGCTAAGCAACTACGGCTTTAGGTTCCCCGTGTTCCTCACCACGTGTCACATGCTGGTGTGCTCGCTCTTCAGCTACGTTATTGTTTCCGTTACGGAAGCTGTTCCGCTGCAGCGCGTGCGGTCCAGGAGCCAGTTTTGGAGGATCGTGGCGCTCGGCGTCGTTTTCTGCTTCTCCGTCGTTTGCGGGAACGTGTCGCTCAGGTACATTCCGGTGTCGTTTAATCAGGCCATCGGCGCCACCACGCCGTTCTTCACCGCCGTTTTCGCTTATGCTGTCAGCGCCAAGAGGGAGGCTTGGGTTACGTACGCCACGCTCTTGCCCGTTGTTGCGGGCGTCGTCATAGCTAGTGGGGGTGAACCAAGTTTTCATCTGTTTGGATTTATAATCTGTGTTTCATCGACTGGTGCCAGAGCATTTAAATCAGTGCTTCAAGATATTTTGTTGTCCTCAGAGGGAGAAAAGTTGAATTCTATGAACCTGCTGCTTTATATGGCTCCAATAGCAGTGATGGTCTTACTTCCTACAATATTGTTGATGGAGGGAAATGTGATTCAGATCACAATGGATCTTGCCAGAAAGGATATAAGAATTTTTTGGTATCTGCTTCTCAGTTCTTCTCTTGCATATTTTGTGAACCTCACTAATTTTTTGGTGACCAAACATACAAGTGCACTTACCCTTCAGGTTTTAGGAAATGCAAAGGGGGCAGTTGCTGTGGTGGTCTCAATTTTGATATTCAAAAACCCCATTTCAATGATAGGAATGCTTGGCTATGCACTCACTGTCATTGGAGTTATCTTGTACAGTGAAACCAAGAAGAGGTATAGCAAAAATTAG 939 0.459 MMMMNNTIIPWSTIGVVIAWYTSNIGVLLLNKYLLSNYGFRFPVFLTTCHMLVCSLFSYVIVSVTEAVPLQRVRSRSQFWRIVALGVVFCFSVVCGNVSLRYIPVSFNQAIGATTPFFTAVFAYAVSAKREAWVTYATLLPVVAGVVIASGGEPSFHLFGFIICVSSTGARAFKSVLQDILLSSEGEKLNSMNLLLYMAPIAVMVLLPTILLMEGNVIQITMDLARKDIRIFWYLLLSSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFKNPISMIGMLGYALTVIGVILYSETKKRYSKN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0665 312 Pfam Triose-phosphate Transporter family 16 303 IPR004853 -
Gso3g0665 312 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 303 - -
Gso3g0665 312 PANTHER SOLUTE CARRIER FAMILY 35 5 311 - -
Gso3g0665 312 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 5 311 - -
Gso3g0665 312 SUPERFAMILY Multidrug resistance efflux transporter EmrE 64 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0665 Gso-Chr3 20237488 20241290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0665 13 308 Organic Solute Cotransporters AT3G11320 76.014 1.73e-166 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0665 - - gmx:100810201 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0665 3 20237488 20241290 Gso18g0278 18 2446516 2449925 ECH
Gso3g0665 3 20237488 20241290 Gso3g0665 3 20237488 20241290 ECH
Gso1g0922 1 37344806 37348994 Gso3g0665 3 20237488 20241290 GST