Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1340 ATGTTCAGTTTCTTGTTGTTTTGCTCTCAGTTTCCCTGTCTATATTCTCTCCTCTCCCTCCTCCTGTGTCTCAGTTTGCTGGCTAGATACGTAGAATTGCTGCTGCTTCTTCAATGGCTCAAATTGCGCTTATTGCTCCTGCAGCAACTGTTATACCTATTATTACTGGCATGTAGGGGGAAACAACAAAAACTATCATATGCTGCAAGAAGAAACAAAGTGAGTTTAGCATCACTGGTTCCTAGTTGGAGGCTTGAAAGGGTTCCAAGGTTAGCCTTATCAAATAATAATAATTCAGGCGATGATAGAAAGACAAGTGTCGTGGTGAAGGTATCTGAAGGAGGAGCTATCTCTCTCCCTCATGGTTGGTCAGCACAAAAGGAAGAAGAAGAAGATCAAATCTCAGAAGGGTTAAAAAAAATGAAGGGTTCGAACAACCGGTTCTTCACGGTGGGGTTGGTGGCGGCGTGGTACTCCTCCAACATTGGCGTGCTTCTCCTGAACAAGTACTTGCTCAGCAACTACGGCTTCAAGTACCCAATCTTCCTGACCATGTGCCACATGACGGCGTGCTCGTTGTTCAGTTACGTCGCCATAGCGTGGATGAAGGTCGTGCCTTTGCAGACCCTTCGATCCAAGGTGCAGTTCTTCAAGATCTCTGCTCTCAGCCTCGTTTTCTGCGTCTCCGTTGTCTTCGGGAACATCTCTCTCCGCTACCTCCCCGTGTCGTTTAACCAAGCCATTGGCGCCACCACGCCCTTCTTCACTGCCGTTTTTGCCTACCTTATGACGTTCAAGAGGGAGGCTTGGCTCACTTACCTCACGCTTGTTCCTGTTGTTACTGGAGTCATCATTGCAAGTGGGGGGGAACCGAGTTTTCATCTGTTTGGATTTATTATATGTGTTGCGGCTACGGCTGCAAGGGCTCTTAAATCAGTGCTACAAGGGATTTTGCTTGCTTCCGAAGGAGAGAAGCTGAATTCTATGAACCTTCTGCTTTACATGGCTCCAATGGCTGTGGTTTTCCTTCTTCCTGCAACACTTATAATGGAAGAGAATGTGGTTGGCATCACGTTGGCTCTTGCCAGAGATGATTCCAAGATCATTTGGTATCTGCTGTTTAATTCGTCACTTGCATATTTTGTCAACCTGACCAACTTTTTGGTCACTAAACATACCAGTGCTCTGACCCTTCAGGTACTAGGAAATGCCAAAGGGGCAGTAGCAGTAGTAGTTTCAATTCTAATATTCAGAAACCCAGTGTCAGTCACTGGAATGATGGGTTACTCACTCACAGTCTTTGGAGTTATACTCTACAGTGAAGCCAAAAAGAGAAGCAAGTGA 1344 0.4598 MFSFLLFCSQFPCLYSLLSLLLCLSLLARYVELLLLLQWLKLRLLLLQQLLYLLLLACRGKQQKLSYAARRNKVSLASLVPSWRLERVPRLALSNNNNSGDDRKTSVVVKVSEGGAISLPHGWSAQKEEEEDQISEGLKKMKGSNNRFFTVGLVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWMKVVPLQTLRSKVQFFKISALSLVFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFIICVAATAARALKSVLQGILLASEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDSKIIWYLLFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYSLTVFGVILYSEAKKRSK* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1340 447 Pfam Triose-phosphate Transporter family 153 440 IPR004853 -
Gso13g1340 447 PANTHER - 56 446 - -
Gso13g1340 447 PANTHER SOLUTE CARRIER FAMILY 35 56 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1340 Gso-Chr13 28897710 28904412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1340 143 447 Organic Solute Cotransporters AT3G11320 90.492 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1340 - - gmx:100785614 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0278 18 2446516 2449925 Gso13g1340 13 28897710 28904412 GST
Gso13g1340 13 28897710 28904412 Gso14g0535 14 5108835 5112351 PCT
Gso13g1340 13 28897710 28904412 Gso2g2158 2 46246119 46249510 PCT
Gso14g0535 14 5108835 5112351 Gso13g1340 13 28897710 28904412 PCT
Gso2g2158 2 46246119 46249510 Gso13g1340 13 28897710 28904412 PCT