Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0234 ATGCCGACGCCCGTGGCAGCCGCGCGCCAATGCCTAACCCCCGACGCCGCCCGCGCCCTCGACGAGGCCGTCTCCGTCGCTCGCCGCCGCGGCCACGCCCAAACGACGTCGCTCCACGCCGTCTCCGCCCTCCTCTCCCTCCCCCTCCTCCGCGACGCCTGCTCCCGCGCCCGAAACTGCGCGTACTCCCCACGCCTCCAGTTCAAGGCCCTCGACCTCTGCCTCTCCGTCTCCCTCGACCGCGCCCCGTCCTCTCACAACCACGCCTCCTCCGACCACGACCCTCCCATCTCGAACTCTCTCATGGCCGCAATAAAACGCTCTCAAGCCAACCAACGCCGCCACCCCGATAACTTCCACTTTTACCCTCACCACCAAACTCAGCAGCAACCGTTTTCTGTTTCTTCTGTCAAAGTAGAGCTTCAGCATTTGATCTTGTCAATCCTGGACGACCCCGTGGTGAGTCGCGTTTTCGCCGAAGCCGGTTTTCGAAGCTCCGATATTAAGCTCGCCATCCTCCGCCCTCTCCGCCCCCGCGGCCCGCCGATTTTCCTCTGCAACTTATCCGAGCCGCCGCGAAGGTTCCCCTTCTTTTTCGGCGGTGGTGACGAGGACGGCGGCGGCGGAGGAGAGAATTTCCGGCGAATCGGGGAGGTTCTGGTCCGGAGCAGGGGGAAGAATCCGCTTCTTCTCGGCGCGTGTGCGGGCGACGCTCTGCGTGGCTTTGCCGAGGCAGTGGAGAAACGGAGAGAAGGGGCTCTGCCGGTGGAATTGTCGGGGCTGCGCGTGGTTTGCATTGCGGAGGAGGTGGCGAGTGGGGACGCGGAGGTGGTGGGGAGGCGCGTGAGGGAGATTGGGAATTTGGCGGAGCAGTGTGTGGGGCCCGGTGTTGTGGTGAGTTTCGGGGACTTGAAGGGTTTTGTGAGCGACGATGAAGAAGGTGGTGGTGAGGGACAGAGTTTGAGGGGTGTGGTTGGAGAATTAGCGAAATTGTTGCAGGTTCATTATGACAAGTTTTGGTTGATGGGTGCTGCTGCTAGTTACGATAATTACTTGAATTTCGTGGGGAAGTTTCCTTCTATAGAGAAAGATTGGGATTTGCAGCTTCTGCCTATTACCTCTGTTAAGCCTCTTTCCGAATCCTATCACCGTCCCAGGTCCAGCTTAATGGATTCATTTGTACCGTTTGGTGGCTTCTTTTCGTCACAGTCTGATTTGAAAGCTCCACTGAGTGGCTCGTTTTATTGTGTTCCCCACTGTCACCAGTGTGGTGGGGAAAGGTGTGAACATGAAGTCCTTGCTTCGTCCAAGGAAAGGTTTTCTGCTTCTTCAGCTGCTGATCCGCATCAATCTAACTTGCCTCCGTGGTTGCAGATTGCAGAATTTGGCTCAACAAAGGGGTTGAATGTTAAGACCAAAGATAATGGTGTTTTGCTCGATAGTAGTGAATCTGGGTCACTGCATAAGAACTTTGACAAGTTATCCCAGCATCTGCACCAGCGAGATGCAATTACTTTTCCAACTGTTGTGGGGTTTCATTGTGGTGCTGAAAAGAAAAAGGAAGATACTGACAATTGCAGCAGCAAATCACCTAGTGAATACATCAATCTCAACTCCCATGTACCTGTTGGCATGCAAATGATGCCTACATCACAATCAAGTAGTCCTTTTCCTGCAGTTTTCATGGCAAAGCAGGAGAAATATAATTCAAAACTTGCTGAGATGTTCCAGAAAGTGGAAGATCACGAGTCAGGTGACCAAAGATCATGCAACATGTCCAATTCAAGTGTGTGTGATGGTAGTCAAATGTCTCCCACATCTGTAACTTCTGTAACCACAGATCTTGGGTTAGGAATATACTCTTCTCCTACCAGCAATAAATTGAAGAAACCCGCTGTTCAATATACAATGGAGCCTCCAAAGGAAATCCCAAGTCGATTTTCTCAAAACTTTAATTTGGCTGATGGGAATATCTTGAAGCATTCATCCCAGTCTTCATCCTGCTTAAGTTTTGACTATTGTGGACAAGTTGATGCAAAAAATCCCAAAATTCTTTTTGAAGTTCTTTCCAAGGAGGTAACCTGGCAAGATGAAGCTTTACGGGCTATCATCAAAACAATTGTTTGCAGCCCAACAAAGAGGGTTAAACACCGTGGACCAAATCAGCCTGGGGACATCTGGATGAATTTTGTTGGATCTGATAGACTTGGTAAAAAGAAAATTGCTGTTTCTCTAGCTGAGCTATTGTATGGTAGCCGTGAAAGCTTTATTTTTGTGGATCTAAGTTCTGAAGAAATGAAAGGATGCGATGTGAAATTCAGAGGGAAGACTGCCCTTGATTTTATTGTAGGGGAGTGTTGCAAGAAACCCCTGTCTGTGGTTTTCCTTGAAAATGTAGAAAAGGCAGATATTCTAGCTCAAAATAGTTTGTCTCTAGCCATCAAGACAGGAAAAATTTCAGACTCACATGGACGAGAAGTTAGTGTAAACAATACAATGTTTGTTTTTTCTTTCTCAGATTACCAAAATAGTTTGATGCCAAGAGGGGAACCTTCCAACTATTCTGAGGAAAGAATACTGAGGGCAAAAGGGGGAGGTATCAAGATAAAAGTTGAACATGTGATTGGAGACATCAGAAGCCAAAGCATCAGTGTAACTAACAATTCAATACATGCGGTTCCTAATCTAAATATCCTAAACAAACGAAAGTTGATTGGTGACGATAAATTTCATGATCTGCATTTTCTCTCTGATACAGCTAAAAGGGCACATACAACATCAAATTGGCTGTTAGATTTGAATCTCCCAGCAGAAGAGAATGAACAGAAACAAACAAATGATGGAAACTCTGATCATGTCTCAACTGAGAACCAAAACCTTTGGTTGCAAGATTTGTGTGATCTGGTTGATGAAACAGTTGTTTTTAAACCTTATGATTTTGAAGCACTTGCGGATAGAGTGTTGAAAGTGATCAGAAGTAACTTCAACAAAATTCTTGGATCCGAGTGTGCATTGCAGATCCAGACAGAAGTCATGGACCAATTTCTTGCAGCTCAATATGTTTCAGACCGGGATAGGGAGGTGGAGAACTGGGTGGAGGAAGTTCTATGTGAAGGATTTACAGAAGTACAGAGAAGGTACAACCTCACTGCTAGTTCTATTGTAAAACTTTTTACGTGTCCTGAGCAAGCTGCTGGTGTACACCTTCCCCCAAGGATAATTTTAGACTGA 3231 0.4766 MPTPVAAARQCLTPDAARALDEAVSVARRRGHAQTTSLHAVSALLSLPLLRDACSRARNCAYSPRLQFKALDLCLSVSLDRAPSSHNHASSDHDPPISNSLMAAIKRSQANQRRHPDNFHFYPHHQTQQQPFSVSSVKVELQHLILSILDDPVVSRVFAEAGFRSSDIKLAILRPLRPRGPPIFLCNLSEPPRRFPFFFGGGDEDGGGGGENFRRIGEVLVRSRGKNPLLLGACAGDALRGFAEAVEKRREGALPVELSGLRVVCIAEEVASGDAEVVGRRVREIGNLAEQCVGPGVVVSFGDLKGFVSDDEEGGGEGQSLRGVVGELAKLLQVHYDKFWLMGAAASYDNYLNFVGKFPSIEKDWDLQLLPITSVKPLSESYHRPRSSLMDSFVPFGGFFSSQSDLKAPLSGSFYCVPHCHQCGGERCEHEVLASSKERFSASSAADPHQSNLPPWLQIAEFGSTKGLNVKTKDNGVLLDSSESGSLHKNFDKLSQHLHQRDAITFPTVVGFHCGAEKKKEDTDNCSSKSPSEYINLNSHVPVGMQMMPTSQSSSPFPAVFMAKQEKYNSKLAEMFQKVEDHESGDQRSCNMSNSSVCDGSQMSPTSVTSVTTDLGLGIYSSPTSNKLKKPAVQYTMEPPKEIPSRFSQNFNLADGNILKHSSQSSSCLSFDYCGQVDAKNPKILFEVLSKEVTWQDEALRAIIKTIVCSPTKRVKHRGPNQPGDIWMNFVGSDRLGKKKIAVSLAELLYGSRESFIFVDLSSEEMKGCDVKFRGKTALDFIVGECCKKPLSVVFLENVEKADILAQNSLSLAIKTGKISDSHGREVSVNNTMFVFSFSDYQNSLMPRGEPSNYSEERILRAKGGGIKIKVEHVIGDIRSQSISVTNNSIHAVPNLNILNKRKLIGDDKFHDLHFLSDTAKRAHTTSNWLLDLNLPAEENEQKQTNDGNSDHVSTENQNLWLQDLCDLVDETVVFKPYDFEALADRVLKVIRSNFNKILGSECALQIQTEVMDQFLAAQYVSDRDREVENWVEEVLCEGFTEVQRRYNLTASSIVKLFTCPEQAAGVHLPPRIILD* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0234 1076 Gene3D - 10 175 IPR036628 -
Gso18g0234 1076 Gene3D - 662 874 IPR027417 -
Gso18g0234 1076 ProSiteProfiles Clp repeat (R) domain profile. 8 181 IPR004176 -
Gso18g0234 1076 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1075 - -
Gso18g0234 1076 MobiDBLite consensus disorder prediction 581 604 - -
Gso18g0234 1076 MobiDBLite consensus disorder prediction 588 604 - -
Gso18g0234 1076 PANTHER PROTEIN SMAX1-LIKE 8 1 1075 - -
Gso18g0234 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 682 1010 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0234 Gso-Chr18 2022740 2028362 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0234 - - gmx:100786125 2078.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0234 18 2022740 2028362 Gso18g0234 18 2022740 2028362 ECH
Gso11g1747 11 24687890 24694303 Gso18g0234 18 2022740 2028362 ECH
Gso18g0234 18 2022740 2028362 Gso13g1386 13 29380216 29385430 GST